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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
70 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170304611
CESI01061295
402390
Bacteroidota
TTC
Glu
>WENV170304707
CESI01071067
402390
Bacteroidota
TTC
Glu
>WENV170304288
CESI01034208
156595
Bacteroidota
TGG
Pro
>WENV170304372
CESI01038496
156595
Bacteroidota
TGG
Pro
>WENV170304930
CESI01093346
156595
Bacteroidota
TGG
Pro
>WENV170305422
CESI01144263
156595
Bacteroidota
TGG
Pro
>WENV170304660
CESI01067521
156605
Bacteroidota
GAC
Val
>WENV170304721
CESI01072409
156605
Bacteroidota
GAC
Val
>WENV170304738
CESI01073947
156605
Bacteroidota
GAC
Val
>WENV170305627
CESI01154758
156605
Bacteroidota
GAC
Val
>WENV170304346
CESI01036485
281336
Bacteroidota
TCC
Gly
>WENV170304366
CESI01038056
281336
Bacteroidota
TCC
Gly
>WENV170305205
CESI01125316
281336
Bacteroidota
TCC
Gly
>WENV170305432
CESI01145397
157796
Bacteroidota
TAC
Val
>WENV170304392
CESI01039979
402090
Bacteroidota
TTG
Gln
>WENV170305231
CESI01127660
402090
Bacteroidota
TTG
Gln
>WENV170305605
CESI01154032
402090
Bacteroidota
TTG
Gln
>WENV170304698
CESI01070019
281190
Bacteroidota
CAT
Met
>WENV170305934
CESI01291262
402171
Bacteroidota
TTC
Glu
>WENV170305006
CESI01101528
287318
Bacteroidota
GAA
Phe
>WENV170304041
CESI01014050
155808
Bacteroidota
TGG
Pro
>WENV170304661
CESI01067589
155808
Bacteroidota
TGG
Pro
>WENV170304233
CESI01028614
176812
Bacteroidota
TCT
Arg
>WENV170304282
CESI01033077
176812
Bacteroidota
TCT
Arg
>WENV170304267
CESI01031766
177083
Bacteroidota
TGT
Thr
>WENV170304395
CESI01040378
399285
Bacteroidota
TTC
Glu
>WENV170305153
CESI01118637
185890
Bacteroidota
TGC
Ala
>WENV170304919
CESI01092191
140868
Bacteroidota
GTA
Tyr
>WENV170304356
CESI01037070
178527
Bacteroidota
CAT
Met
>WENV170304479
CESI01047675
156596
Bacteroidota
TAC
Val
>WENV170305213
CESI01125917
156596
Bacteroidota
TAC
Val
>WENV170304343
CESI01036195
299065
Bacteroidota
TTG
Gln
>WENV170305599
CESI01153883
299065
Bacteroidota
TTG
Gln
>WENV170305663
CESI01156027
299065
Bacteroidota
TTG
Gln
>WENV170305677
CESI01156210
483389
Bacteroidota
GCA
Cys
>WENV170306010
CESI01303300
286464
Bacteroidota
CAT
Met
>WENV170305398
CESI01142715
181598
Bacteroidota
GTT
Asn
>WENV170305462
CESI01147778
181598
Bacteroidota
GTT
Asn
>WENV170305518
CESI01150820
181598
Bacteroidota
GTT
Asn
>WENV170304393
CESI01040321
178179
Bacteroidota
GGC
Ala
>WENV170304755
CESI01074425
178179
Bacteroidota
GGC
Ala
>WENV170303992
CESI01010286
282832
Bacteroidota
TTG
Gln
>WENV170304831
CESI01083023
402343
Bacteroidota
CCA
Trp
>WENV170304256
CESI01030898
118418
Bacteroidota
TAG
Leu
>WENV170304473
CESI01047264
118418
Bacteroidota
TAG
Leu
>WENV170304637
CESI01064399
118418
Bacteroidota
TAG
Leu
>WENV170305274
CESI01132206
118418
Bacteroidota
TAG
Leu
>WENV170304351
CESI01036756
399898
Bacteroidota
GGT
Thr
>WENV170304052
CESI01015005
176817
Bacteroidota
CAT
Met
>WENV170304338
CESI01035787
176817
Bacteroidota
CAT
Met
>WENV170304355
CESI01037002
289409
Bacteroidota
TCC
Gly
>WENV170304133
CESI01021400
296664
Bacteroidota
GAA
Phe
>WENV170304991
CESI01099917
296664
Bacteroidota
GAA
Phe
>WENV170304225
CESI01027872
186597
Bacteroidota
GTG
His
>WENV170303958
CESI01007136
156424
Bacteroidota
TGG
Pro
>WENV170304365
CESI01037847
156424
Bacteroidota
TGG
Pro
>WENV170304877
CESI01087209
179598
Bacteroidota
CAT
Met
>WENV170305674
CESI01156158
179598
Bacteroidota
CAT
Met
>WENV170305259
CESI01131139
156340
Bacteroidota
GGG
Pro
>WENV170305104
CESI01111604
178366
Bacteroidota
CAT
Met
>WENV170304836
CESI01083279
56162
Bacteroidota
TGA
Ser
>WENV170303952
CESI01006607
299085
Bacteroidota
TTT
Lys
>WENV170304166
CESI01024082
299085
Bacteroidota
TTT
Lys
>WENV170304347
CESI01036519
299085
Bacteroidota
TTT
Lys
>WENV170305264
CESI01131673
299085
Bacteroidota
TTT
Lys
>WENV170305283
CESI01133228
299085
Bacteroidota
TTT
Lys
>WENV170305364
CESI01139358
299085
Bacteroidota
TTT
Lys
>WENV170305658
CESI01155844
299085
Bacteroidota
TTT
Lys
>WENV170305856
CESI01267731
183378
Bacteroidota
GGC
Ala
>WENV170305210
CESI01125427
480568
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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