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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170421489
CEUN01078297
400818
Bacteroidota
TTC
Glu
>WENV170421867
CEUN01110135
400818
Bacteroidota
TTC
Glu
>WENV170420663
CEUN01014967
222068
Bacteroidota
GAT
Ile
>WENV170421438
CEUN01074526
156605
Bacteroidota
GAC
Val
>WENV170420493
CEUN01005292
20278
Bacteroidota
GGA
Ser
>WENV170420774
CEUN01023349
305664
Bacteroidota
CAT
Met
>WENV170421055
CEUN01044208
305664
Bacteroidota
CAT
Met
>WENV170421230
CEUN01058404
336507
Bacteroidota
TCC
Gly
>WENV170421466
CEUN01076576
155808
Bacteroidota
TGG
Pro
>WENV170421971
CEUN01119925
229336
Bacteroidota
GGC
Ala
>WENV170420515
CEUN01006753
74253
Bacteroidota
GCT
Ser
>WENV170420555
CEUN01008553
100107
Bacteroidota
GTA
Tyr
>WENV170421030
CEUN01041600
21789
Bacteroidota
GGA
Ser
>WENV170421161
CEUN01053317
121312
Bacteroidota
TAG
Leu
>WENV170422161
CEUN01138769
284239
Bacteroidota
TTT
Lys
>WENV170422278
CEUN01147577
227539
Bacteroidota
GTT
Asn
>WENV170422510
CEUN01165775
227539
Bacteroidota
GTT
Asn
>WENV170422326
CEUN01151556
193718
Bacteroidota
GTC
Asp
>WENV170421091
CEUN01047476
181598
Bacteroidota
GTT
Asn
>WENV170422062
CEUN01128702
24958
Bacteroidota
GGA
Ser
>WENV170423363
CEUN01399976
183378
Bacteroidota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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