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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170469669
CEVF01133205
303411
Bacteroidota
>WENV170469246
CEVF01097520
176863
Bacteroidota
CAT
Met
>WENV170468170
CEVF01014924
284409
Bacteroidota
CAT
Met
>WENV170469715
CEVF01136642
284409
Bacteroidota
CAT
Met
>WENV170470613
CEVF01306155
195088
Bacteroidota
CAT
Met
>WENV170470076
CEVF01154605
178366
Bacteroidota
CAT
Met
>WENV170468777
CEVF01059569
295349
Bacteroidota
CCA
Trp
>WENV170468581
CEVF01044470
281538
Bacteroidota
GAA
Phe
>WENV170470064
CEVF01154251
281538
Bacteroidota
GAA
Phe
>WENV170468447
CEVF01033701
296664
Bacteroidota
GAA
Phe
>WENV170469437
CEVF01115520
155807
Bacteroidota
GAC
Val
>WENV170470031
CEVF01153464
483389
Bacteroidota
GCA
Cys
>WENV170468618
CEVF01048299
480568
Bacteroidota
GCA
Cys
>WENV170468026
CEVF01005360
299032
Bacteroidota
GCC
Gly
>WENV170468813
CEVF01062286
21872
Bacteroidota
GGA
Ser
>WENV170470121
CEVF01154742
179817
Bacteroidota
GGC
Ala
>WENV170468593
CEVF01045824
179695
Bacteroidota
GGG
Pro
>WENV170470604
CEVF01305117
179695
Bacteroidota
GGG
Pro
>WENV170468429
CEVF01032831
413853
Bacteroidota
GGT
Thr
>WENV170468400
CEVF01030749
179905
Bacteroidota
GTT
Asn
>WENV170468458
CEVF01034188
181598
Bacteroidota
GTT
Asn
>WENV170468599
CEVF01046411
181598
Bacteroidota
GTT
Asn
>WENV170469200
CEVF01093600
181598
Bacteroidota
GTT
Asn
>WENV170470110
CEVF01154719
156076
Bacteroidota
TAC
Val
>WENV170469546
CEVF01123150
121312
Bacteroidota
TAG
Leu
>WENV170469910
CEVF01149148
117927
Bacteroidota
TAG
Leu
>WENV170469078
CEVF01083113
176812
Bacteroidota
TCT
Arg
>WENV170470016
CEVF01153065
56162
Bacteroidota
TGA
Ser
>WENV170469970
CEVF01151736
282832
Bacteroidota
TTG
Gln
>WENV170468945
CEVF01072539
286857
Bacteroidota
TTT
Lys
>WENV170469905
CEVF01148831
286857
Bacteroidota
TTT
Lys
>WENV170469994
CEVF01152239
286857
Bacteroidota
TTT
Lys
>WENV170468883
CEVF01068519
299085
Bacteroidota
TTT
Lys
>WENV170468898
CEVF01069791
299085
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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