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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180005574
FLRW01107835
400161
Bacteroidota
GGT
Thr
>WENV180005693
FLRW01236803
402390
Bacteroidota
TTC
Glu
>WENV180005502
FLRW01075000
400949
Bacteroidota
CCT
Arg
>WENV180005415
FLRW01023127
157895
Bacteroidota
TAC
Val
>WENV180005735
FLRW01290295
178572
Bacteroidota
CAT
Met
>WENV180005218
FLRW01000768
172085
Bacteroidota
TAC
Val
>WENV180005689
FLRW01231349
56385
Bacteroidota
TGA
Ser
>WENV180005534
FLRW01084960
483528
Bacteroidota
GCA
Cys
>WENV180005635
FLRW01164972
483528
Bacteroidota
GCA
Cys
>WENV180005463
FLRW01047798
431429
Bacteroidota
CCT
Arg
>WENV180005501
FLRW01073891
312035
Bacteroidota
CCA
Trp
>WENV180005668
FLRW01212791
312035
Bacteroidota
CCA
Trp
>WENV180005469
FLRW01051070
404663
Bacteroidota
GGT
Thr
>WENV180005461
FLRW01047461
175886
Bacteroidota
GGC
Ala
>WENV180005554
FLRW01093604
175886
Bacteroidota
GGC
Ala
>WENV180005583
FLRW01114026
175886
Bacteroidota
GGC
Ala
>WENV180005721
FLRW01261954
115044
Bacteroidota
GTA
Tyr
>WENV180005215
FLRW01000669
46648
Bacteroidota
TAA
Leu
>WENV180005474
FLRW01054053
118432
Bacteroidota
CAG
Leu
>WENV180005210
FLRW01000508
280478
Bacteroidota
GCC
Gly
>WENV180005491
FLRW01066464
280478
Bacteroidota
GCC
Gly
>WENV180005727
FLRW01275406
87360
Bacteroidota
GCT
Ser
>WENV180005650
FLRW01198358
481284
Bacteroidota
CCA
Trp
>WENV180005587
FLRW01115634
284457
Bacteroidota
CAT
Met
>WENV180005752
FLRW01314321
372845
Bacteroidota
CCA
Trp
>WENV180005701
FLRW01242992
331443
Bacteroidota
CGT
Thr
>WENV180005425
FLRW01027639
118220
Bacteroidota
GTA
Tyr
>WENV180005573
FLRW01107835
118220
Bacteroidota
GTA
Tyr
>WENV180005219
FLRW01000768
118220
Bacteroidota
GTA
Tyr
>WENV180005462
FLRW01047575
179653
Bacteroidota
GTG
His
>WENV180005734
FLRW01286151
481328
Bacteroidota
TTG
Gln
>WENV180005557
FLRW01096647
285750
Bacteroidota
CCC
Gly
>WENV180005445
FLRW01038786
73509
Bacteroidota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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