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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
104 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180009275
FLSC01000391
118433
Bacteroidota
TAG
Leu
>WENV180009383
FLSC01002307
400161
Bacteroidota
GGT
Thr
>WENV180009409
FLSC01002589
400161
Bacteroidota
GGT
Thr
>WENV180009418
FLSC01002689
282852
Bacteroidota
TTT
Lys
>WENV180009571
FLSC01015885
282852
Bacteroidota
TTT
Lys
>WENV180009646
FLSC01035443
282852
Bacteroidota
TTT
Lys
>WENV180009857
FLSC01129219
282852
Bacteroidota
TTT
Lys
>WENV180010371
FLSC01482900
282852
Bacteroidota
TTT
Lys
>WENV180010207
FLSC01406160
481329
Bacteroidota
>WENV180010428
FLSC01483072
481329
Bacteroidota
>WENV180009317
FLSC01000848
400949
Bacteroidota
CCT
Arg
>WENV180009447
FLSC01002897
400949
Bacteroidota
CCT
Arg
>WENV180009596
FLSC01022115
400949
Bacteroidota
CCT
Arg
>WENV180009555
FLSC01013102
201819
Bacteroidota
CAT
Met
>WENV180010165
FLSC01362571
284237
Bacteroidota
TTT
Lys
>WENV180010209
FLSC01409135
222068
Bacteroidota
GAT
Ile
>WENV180009472
FLSC01004032
481267
Bacteroidota
CTG
Gln
>WENV180009364
FLSC01001955
283316
Bacteroidota
CCA
Trp
>WENV180009384
FLSC01002307
283316
Bacteroidota
CCA
Trp
>WENV180009259
FLSC01000179
178571
Bacteroidota
GTT
Asn
>WENV180009517
FLSC01008368
178571
Bacteroidota
GTT
Asn
>WENV180009597
FLSC01022771
178571
Bacteroidota
GTT
Asn
>WENV180009725
FLSC01059627
178571
Bacteroidota
GTT
Asn
>WENV180010114
FLSC01310986
178571
Bacteroidota
GTT
Asn
>WENV180010401
FLSC01483005
178571
Bacteroidota
GTT
Asn
>WENV180009421
FLSC01002804
178572
Bacteroidota
CAT
Met
>WENV180010370
FLSC01482891
178572
Bacteroidota
CAT
Met
>WENV180009780
FLSC01082184
56385
Bacteroidota
TGA
Ser
>WENV180010310
FLSC01470659
56385
Bacteroidota
TGA
Ser
>WENV180009833
FLSC01115744
483528
Bacteroidota
GCA
Cys
>WENV180009530
FLSC01009322
431429
Bacteroidota
CCT
Arg
>WENV180010189
FLSC01386317
30327
Bacteroidota
GCT
Ser
>WENV180010399
FLSC01482994
30327
Bacteroidota
GCT
Ser
>WENV180009410
FLSC01002589
312035
Bacteroidota
CCA
Trp
>WENV180010098
FLSC01300416
178133
Bacteroidota
GAT
Ile
>WENV180009491
FLSC01005428
242241
Bacteroidota
GTC
Asp
>WENV180010324
FLSC01479821
242241
Bacteroidota
GTC
Asp
>WENV180010325
FLSC01479821
242241
Bacteroidota
GTC
Asp
>WENV180009453
FLSC01003062
242241
Bacteroidota
GTC
Asp
>WENV180009454
FLSC01003062
242241
Bacteroidota
GTC
Asp
>WENV180010390
FLSC01482941
404663
Bacteroidota
GGT
Thr
>WENV180009758
FLSC01075009
175944
Bacteroidota
CAT
Met
>WENV180010005
FLSC01221270
175886
Bacteroidota
GGC
Ala
>WENV180009294
FLSC01000491
283315
Bacteroidota
CGT
Thr
>WENV180009459
FLSC01003650
283315
Bacteroidota
CGT
Thr
>WENV180010429
FLSC01483073
283315
Bacteroidota
CGT
Thr
>WENV180009378
FLSC01002247
400815
Bacteroidota
TTC
Glu
>WENV180009910
FLSC01155880
400815
Bacteroidota
TTC
Glu
>WENV180010311
FLSC01472303
156128
Bacteroidota
GGG
Pro
>WENV180010378
FLSC01482912
156128
Bacteroidota
GGG
Pro
>WENV180010398
FLSC01482993
20533
Bacteroidota
GGA
Ser
>WENV180009940
FLSC01184031
483469
Bacteroidota
TTG
Gln
>WENV180010001
FLSC01218301
483469
Bacteroidota
TTG
Gln
>WENV180009267
FLSC01000262
404109
Bacteroidota
CTC
Glu
>WENV180009268
FLSC01000262
404109
Bacteroidota
CTC
Glu
>WENV180009269
FLSC01000262
404109
Bacteroidota
CTC
Glu
>WENV180009352
FLSC01001748
156383
Bacteroidota
GGG
Pro
>WENV180010233
FLSC01427104
156383
Bacteroidota
GGG
Pro
>WENV180010405
FLSC01483019
156383
Bacteroidota
GGG
Pro
>WENV180009985
FLSC01212396
147999
Bacteroidota
CAA
Leu
>WENV180009262
FLSC01000241
46648
Bacteroidota
TAA
Leu
>WENV180009316
FLSC01000848
46648
Bacteroidota
TAA
Leu
>WENV180010062
FLSC01263169
46648
Bacteroidota
TAA
Leu
>WENV180010155
FLSC01354257
46648
Bacteroidota
TAA
Leu
>WENV180010078
FLSC01281056
404661
Bacteroidota
GTG
His
>WENV180009298
FLSC01000491
118432
Bacteroidota
CAG
Leu
>WENV180009458
FLSC01003621
280478
Bacteroidota
GCC
Gly
>WENV180009252
FLSC01000033
284236
Bacteroidota
CGG
Pro
>WENV180010255
FLSC01440892
481284
Bacteroidota
CCA
Trp
>WENV180009539
FLSC01010092
187400
Bacteroidota
GTT
Asn
>WENV180009991
FLSC01214179
290466
Bacteroidota
CCA
Trp
>WENV180009250
FLSC01000031
284457
Bacteroidota
CAT
Met
>WENV180009469
FLSC01003708
284457
Bacteroidota
CAT
Met
>WENV180009755
FLSC01072693
284457
Bacteroidota
CAT
Met
>WENV180009781
FLSC01083163
284457
Bacteroidota
CAT
Met
>WENV180010391
FLSC01482941
372845
Bacteroidota
CCA
Trp
>WENV180009506
FLSC01007226
178134
Bacteroidota
TGG
Pro
>WENV180010286
FLSC01455377
178134
Bacteroidota
TGG
Pro
>WENV180009884
FLSC01143709
331443
Bacteroidota
CGT
Thr
>WENV180009381
FLSC01002307
118220
Bacteroidota
GTA
Tyr
>WENV180009382
FLSC01002307
118220
Bacteroidota
GTA
Tyr
>WENV180009408
FLSC01002589
118220
Bacteroidota
GTA
Tyr
>WENV180009489
FLSC01005406
118220
Bacteroidota
GTA
Tyr
>WENV180009637
FLSC01032905
118220
Bacteroidota
GTA
Tyr
>WENV180010241
FLSC01433007
118220
Bacteroidota
GTA
Tyr
>WENV180009400
FLSC01002578
460845
Bacteroidota
CTC
Glu
>WENV180009401
FLSC01002578
460845
Bacteroidota
CTC
Glu
>WENV180009420
FLSC01002775
481044
Bacteroidota
>WENV180010219
FLSC01418252
179653
Bacteroidota
GTG
His
>WENV180010406
FLSC01483021
179653
Bacteroidota
GTG
His
>WENV180009709
FLSC01054565
482908
Bacteroidota
GCA
Cys
>WENV180009318
FLSC01000848
481328
Bacteroidota
TTG
Gln
>WENV180009347
FLSC01001647
481328
Bacteroidota
TTG
Gln
>WENV180009836
FLSC01117058
481328
Bacteroidota
TTG
Gln
>WENV180010238
FLSC01432034
285750
Bacteroidota
CCC
Gly
>WENV180009280
FLSC01000416
284456
Bacteroidota
CGG
Pro
>WENV180009531
FLSC01009523
284456
Bacteroidota
CGG
Pro
>WENV180009299
FLSC01000491
73509
Bacteroidota
GAG
Leu
>WENV180010274
FLSC01447768
73509
Bacteroidota
GAG
Leu
>WENV180010289
FLSC01455377
73509
Bacteroidota
GAG
Leu
>WENV180009295
FLSC01000491
481045
Bacteroidota
CCC
Gly
>WENV180010245
FLSC01437408
481045
Bacteroidota
CCC
Gly
>WENV180009648
FLSC01036663
404662
Bacteroidota
CCT
Arg
>WENV180009853
FLSC01127088
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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