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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180010872
FLSI01000134
118221
Bacteroidota
CAA
Leu
>WENV180010878
FLSI01000310
179822
Bacteroidota
TGC
Ala
>WENV180010891
FLSI01002736
178571
Bacteroidota
GTT
Asn
>WENV180010893
FLSI01003181
290468
Bacteroidota
CTT
Lys
>WENV180010895
FLSI01003976
331443
Bacteroidota
CGT
Thr
>WENV180010896
FLSI01004111
158068
Bacteroidota
GGG
Pro
>WENV180010898
FLSI01005144
20533
Bacteroidota
GGA
Ser
>WENV180010900
FLSI01006361
179471
Bacteroidota
CAT
Met
>WENV180010902
FLSI01007061
483528
Bacteroidota
GCA
Cys
>WENV180010904
FLSI01008972
46648
Bacteroidota
TAA
Leu
>WENV180010909
FLSI01011452
178571
Bacteroidota
GTT
Asn
>WENV180010912
FLSI01012419
400949
Bacteroidota
CCT
Arg
>WENV180010919
FLSI01018472
404661
Bacteroidota
GTG
His
>WENV180010921
FLSI01020354
290467
Bacteroidota
TTT
Lys
>WENV180010940
FLSI01029237
187358
Bacteroidota
GTG
His
>WENV180010941
FLSI01029518
157146
Bacteroidota
TAC
Val
>WENV180010942
FLSI01029518
157146
Bacteroidota
TAC
Val
>WENV180010944
FLSI01030752
400949
Bacteroidota
CCT
Arg
>WENV180010945
FLSI01030950
187426
Bacteroidota
GGC
Ala
>WENV180010953
FLSI01033299
404662
Bacteroidota
CCT
Arg
>WENV180010956
FLSI01035867
175944
Bacteroidota
CAT
Met
>WENV180010959
FLSI01037026
481329
Bacteroidota
>WENV180010960
FLSI01037387
400815
Bacteroidota
TTC
Glu
>WENV180010962
FLSI01039079
481045
Bacteroidota
CCC
Gly
>WENV180010967
FLSI01040982
30780
Bacteroidota
GCT
Ser
>WENV180010972
FLSI01045138
482908
Bacteroidota
GCA
Cys
>WENV180010980
FLSI01053638
431429
Bacteroidota
CCT
Arg
>WENV180010984
FLSI01055510
498978
Bacteroidota
CCA
Trp
>WENV180010987
FLSI01056635
56385
Bacteroidota
TGA
Ser
>WENV180010988
FLSI01061942
284456
Bacteroidota
CGG
Pro
>WENV180010990
FLSI01062901
481267
Bacteroidota
CTG
Gln
>WENV180010992
FLSI01064797
187105
Bacteroidota
CAT
Met
>WENV180010993
FLSI01064942
482907
Bacteroidota
CTG
Gln
>WENV180011005
FLSI01073313
290466
Bacteroidota
CCA
Trp
>WENV180011016
FLSI01084179
400815
Bacteroidota
TTC
Glu
>WENV180011026
FLSI01091084
207889
Bacteroidota
CAT
Met
>WENV180011034
FLSI01098456
491385
Bacteroidota
TTG
Gln
>WENV180011036
FLSI01099428
482909
Bacteroidota
TTG
Gln
>WENV180011043
FLSI01108598
312035
Bacteroidota
CCA
Trp
>WENV180011050
FLSI01110966
481329
Bacteroidota
>WENV180011066
FLSI01119491
284456
Bacteroidota
CGG
Pro
>WENV180011078
FLSI01130690
481284
Bacteroidota
CCA
Trp
>WENV180011084
FLSI01134495
75001
Bacteroidota
CAA
Leu
>WENV180011088
FLSI01138838
57302
Bacteroidota
TAA
Leu
>WENV180011102
FLSI01158587
156128
Bacteroidota
GGG
Pro
>WENV180011120
FLSI01181386
222068
Bacteroidota
GAT
Ile
>WENV180011139
FLSI01201707
56318
Bacteroidota
TGA
Ser
>WENV180011140
FLSI01206035
283316
Bacteroidota
CCA
Trp
>WENV180011143
FLSI01211990
187632
Bacteroidota
TCG
Arg
>WENV180011156
FLSI01227041
75391
Bacteroidota
GAG
Leu
>WENV180011179
FLSI01257405
292594
Bacteroidota
GGG
Pro
>WENV180011184
FLSI01262345
47445
Bacteroidota
TAA
Leu
>WENV180011192
FLSI01267469
481328
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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