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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
100 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180011217
FLSK01000010
30327
Bacteroidota
GCT
Ser
>WENV180011219
FLSK01000013
242241
Bacteroidota
GTC
Asp
>WENV180011220
FLSK01000013
242241
Bacteroidota
GTC
Asp
>WENV180011221
FLSK01000013
172085
Bacteroidota
TAC
Val
>WENV180011222
FLSK01000035
282852
Bacteroidota
TTT
Lys
>WENV180011224
FLSK01000074
175944
Bacteroidota
CAT
Met
>WENV180011225
FLSK01000074
175944
Bacteroidota
CAT
Met
>WENV180011236
FLSK01000167
242241
Bacteroidota
GTC
Asp
>WENV180011237
FLSK01000167
242241
Bacteroidota
GTC
Asp
>WENV180011242
FLSK01000217
56385
Bacteroidota
TGA
Ser
>WENV180011252
FLSK01000352
283315
Bacteroidota
CGT
Thr
>WENV180011255
FLSK01000368
118220
Bacteroidota
GTA
Tyr
>WENV180011256
FLSK01000368
400161
Bacteroidota
GGT
Thr
>WENV180011257
FLSK01000368
312035
Bacteroidota
CCA
Trp
>WENV180011263
FLSK01000518
312035
Bacteroidota
CCA
Trp
>WENV180011265
FLSK01000525
400161
Bacteroidota
GGT
Thr
>WENV180011274
FLSK01000838
178572
Bacteroidota
CAT
Met
>WENV180011275
FLSK01000887
20533
Bacteroidota
GGA
Ser
>WENV180011288
FLSK01001103
481044
Bacteroidota
>WENV180011289
FLSK01001103
172085
Bacteroidota
TAC
Val
>WENV180011290
FLSK01001103
172085
Bacteroidota
TAC
Val
>WENV180011302
FLSK01001239
172085
Bacteroidota
TAC
Val
>WENV180011303
FLSK01001239
172085
Bacteroidota
TAC
Val
>WENV180011317
FLSK01001428
400949
Bacteroidota
CCT
Arg
>WENV180011334
FLSK01001498
178571
Bacteroidota
GTT
Asn
>WENV180011362
FLSK01002195
178571
Bacteroidota
GTT
Asn
>WENV180011401
FLSK01002879
481328
Bacteroidota
TTG
Gln
>WENV180011461
FLSK01003077
481267
Bacteroidota
CTG
Gln
>WENV180011463
FLSK01003092
46648
Bacteroidota
TAA
Leu
>WENV180011480
FLSK01003118
431429
Bacteroidota
CCT
Arg
>WENV180011484
FLSK01003135
178134
Bacteroidota
TGG
Pro
>WENV180011487
FLSK01003135
73509
Bacteroidota
GAG
Leu
>WENV180011489
FLSK01003137
282852
Bacteroidota
TTT
Lys
>WENV180011494
FLSK01003156
400815
Bacteroidota
TTC
Glu
>WENV180011514
FLSK01003214
283315
Bacteroidota
CGT
Thr
>WENV180011525
FLSK01003452
400161
Bacteroidota
GGT
Thr
>WENV180011526
FLSK01003452
283316
Bacteroidota
CCA
Trp
>WENV180011532
FLSK01003551
118220
Bacteroidota
GTA
Tyr
>WENV180011551
FLSK01004105
172085
Bacteroidota
TAC
Val
>WENV180011552
FLSK01004105
118220
Bacteroidota
GTA
Tyr
>WENV180011556
FLSK01004418
242241
Bacteroidota
GTC
Asp
>WENV180011567
FLSK01005258
284456
Bacteroidota
CGG
Pro
>WENV180011582
FLSK01006082
118220
Bacteroidota
GTA
Tyr
>WENV180011590
FLSK01006455
460845
Bacteroidota
CTC
Glu
>WENV180011591
FLSK01006455
460845
Bacteroidota
CTC
Glu
>WENV180011599
FLSK01007019
172085
Bacteroidota
TAC
Val
>WENV180011600
FLSK01007019
172085
Bacteroidota
TAC
Val
>WENV180011614
FLSK01008728
481045
Bacteroidota
CCC
Gly
>WENV180011622
FLSK01009538
156383
Bacteroidota
GGG
Pro
>WENV180011634
FLSK01011117
178572
Bacteroidota
CAT
Met
>WENV180011651
FLSK01014115
179653
Bacteroidota
GTG
His
>WENV180011658
FLSK01015542
372845
Bacteroidota
CCA
Trp
>WENV180011669
FLSK01017684
228511
Bacteroidota
GAT
Ile
>WENV180011695
FLSK01023741
242241
Bacteroidota
GTC
Asp
>WENV180011696
FLSK01023800
283316
Bacteroidota
CCA
Trp
>WENV180011702
FLSK01024977
400949
Bacteroidota
CCT
Arg
>WENV180011706
FLSK01025993
283316
Bacteroidota
CCA
Trp
>WENV180011746
FLSK01037361
282852
Bacteroidota
TTT
Lys
>WENV180011747
FLSK01037578
284457
Bacteroidota
CAT
Met
>WENV180011752
FLSK01037812
404662
Bacteroidota
CCT
Arg
>WENV180011755
FLSK01038449
282852
Bacteroidota
TTT
Lys
>WENV180011774
FLSK01042474
118433
Bacteroidota
TAG
Leu
>WENV180011786
FLSK01044931
20533
Bacteroidota
GGA
Ser
>WENV180011789
FLSK01046077
285750
Bacteroidota
CCC
Gly
>WENV180011791
FLSK01046805
46648
Bacteroidota
TAA
Leu
>WENV180011856
FLSK01067996
404661
Bacteroidota
GTG
His
>WENV180011886
FLSK01078960
172085
Bacteroidota
TAC
Val
>WENV180011902
FLSK01085390
400949
Bacteroidota
CCT
Arg
>WENV180011946
FLSK01108099
312035
Bacteroidota
CCA
Trp
>WENV180011952
FLSK01110652
175886
Bacteroidota
GGC
Ala
>WENV180011985
FLSK01120559
118433
Bacteroidota
TAG
Leu
>WENV180012011
FLSK01129438
172085
Bacteroidota
TAC
Val
>WENV180012022
FLSK01135869
242241
Bacteroidota
GTC
Asp
>WENV180012023
FLSK01135869
242241
Bacteroidota
GTC
Asp
>WENV180012094
FLSK01173572
292594
Bacteroidota
GGG
Pro
>WENV180012104
FLSK01188073
75001
Bacteroidota
CAA
Leu
>WENV180012114
FLSK01190885
400850
Bacteroidota
TTC
Glu
>WENV180012132
FLSK01203009
483528
Bacteroidota
GCA
Cys
>WENV180012135
FLSK01203597
280478
Bacteroidota
GCC
Gly
>WENV180012152
FLSK01218410
20533
Bacteroidota
GGA
Ser
>WENV180012170
FLSK01227898
179653
Bacteroidota
GTG
His
>WENV180012178
FLSK01237817
481329
Bacteroidota
>WENV180012179
FLSK01237817
172085
Bacteroidota
TAC
Val
>WENV180012180
FLSK01237817
118220
Bacteroidota
GTA
Tyr
>WENV180012187
FLSK01246348
73509
Bacteroidota
GAG
Leu
>WENV180012246
FLSK01292026
118432
Bacteroidota
CAG
Leu
>WENV180012247
FLSK01292026
73509
Bacteroidota
GAG
Leu
>WENV180012284
FLSK01325446
46648
Bacteroidota
TAA
Leu
>WENV180012309
FLSK01352343
293174
Bacteroidota
CCC
Gly
>WENV180012327
FLSK01373302
187105
Bacteroidota
CAT
Met
>WENV180012336
FLSK01376386
178571
Bacteroidota
GTT
Asn
>WENV180012341
FLSK01376453
56385
Bacteroidota
TGA
Ser
>WENV180012344
FLSK01376504
156383
Bacteroidota
GGG
Pro
>WENV180012367
FLSK01376755
242241
Bacteroidota
GTC
Asp
>WENV180012369
FLSK01376780
400949
Bacteroidota
CCT
Arg
>WENV180012384
FLSK01376848
118433
Bacteroidota
TAG
Leu
>WENV180012385
FLSK01376853
283315
Bacteroidota
CGT
Thr
>WENV180012386
FLSK01376853
481045
Bacteroidota
CCC
Gly
>WENV180012387
FLSK01376857
284236
Bacteroidota
CGG
Pro
>WENV180012393
FLSK01376881
284457
Bacteroidota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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