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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183541525
OOAL01000114
235097
Bacteroidota
TTT
Lys
>WENV183541543
OOAL01000326
235097
Bacteroidota
TTT
Lys
>WENV183541559
OOAL01000508
235097
Bacteroidota
TTT
Lys
>WENV183541566
OOAL01000654
235102
Bacteroidota
CGT
Thr
>WENV183541526
OOAL01000135
436206
Bacteroidota
TTG
Gln
>WENV183541551
OOAL01000432
436206
Bacteroidota
TTG
Gln
>WENV183541613
OOAL01001357
436206
Bacteroidota
TTG
Gln
>WENV183541539
OOAL01000227
338124
Bacteroidota
CCG
Arg
>WENV183541479
OOAL01000025
338132
Bacteroidota
GCA
Cys
>WENV183541474
OOAL01000017
301449
Bacteroidota
CGG
Pro
>WENV183541556
OOAL01000482
301449
Bacteroidota
CGG
Pro
>WENV183541475
OOAL01000018
144656
Bacteroidota
GTG
His
>WENV183541564
OOAL01000589
235207
Bacteroidota
CAT
Met
>WENV183541523
OOAL01000111
235207
Bacteroidota
CAT
Met
>WENV183541549
OOAL01000382
80607
Bacteroidota
GTA
Tyr
>WENV183541521
OOAL01000098
80607
Bacteroidota
GTA
Tyr
>WENV183541616
OOAL01001745
144590
Bacteroidota
GTT
Asn
>WENV183541507
OOAL01000071
144590
Bacteroidota
GTT
Asn
>WENV183541510
OOAL01000080
95559
Bacteroidota
TAG
Leu
>WENV183541504
OOAL01000067
144655
Bacteroidota
GGC
Ala
>WENV183541509
OOAL01000073
44852
Bacteroidota
TAA
Leu
>WENV183541458
OOAL01000004
425638
Bacteroidota
CTG
Gln
>WENV183541520
OOAL01000092
55270
Bacteroidota
TGA
Ser
>WENV183541557
OOAL01000494
16224
Bacteroidota
GGA
Ser
>WENV183541476
OOAL01000018
16224
Bacteroidota
GGA
Ser
>WENV183541477
OOAL01000019
16220
Bacteroidota
GGA
Ser
>WENV183541536
OOAL01000191
338125
Bacteroidota
CCT
Arg
>WENV183541500
OOAL01000053
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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