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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183542401
OOAM01003171
235102
Bacteroidota
CGT
Thr
>WENV183541885
OOAM01000185
144657
Bacteroidota
CGG
Pro
>WENV183541732
OOAM01000006
339341
Bacteroidota
GGT
Thr
>WENV183541769
OOAM01000023
343138
Bacteroidota
CCT
Arg
>WENV183541783
OOAM01000045
58715
Bacteroidota
GAG
Leu
>WENV183542050
OOAM01000502
46165
Bacteroidota
TGA
Ser
>WENV183542130
OOAM01000785
338486
Bacteroidota
CAT
Met
>WENV183541747
OOAM01000010
338486
Bacteroidota
CAT
Met
>WENV183542483
OOAM01004948
48053
Bacteroidota
TGA
Ser
>WENV183542277
OOAM01001557
48053
Bacteroidota
TGA
Ser
>WENV183542125
OOAM01000762
48053
Bacteroidota
TGA
Ser
>WENV183542102
OOAM01000678
48053
Bacteroidota
TGA
Ser
>WENV183542353
OOAM01002586
415410
Bacteroidota
TTG
Gln
>WENV183542281
OOAM01001584
415410
Bacteroidota
TTG
Gln
>WENV183541905
OOAM01000209
59689
Bacteroidota
CAG
Leu
>WENV183541847
OOAM01000127
235182
Bacteroidota
>WENV183542695
OOAM01019112
338124
Bacteroidota
CCG
Arg
>WENV183541771
OOAM01000024
235203
Bacteroidota
TTT
Lys
>WENV183541728
OOAM01000004
235203
Bacteroidota
TTT
Lys
>WENV183542048
OOAM01000502
238121
Bacteroidota
CTT
Lys
>WENV183542015
OOAM01000444
126641
Bacteroidota
TAC
Val
>WENV183542473
OOAM01004560
338132
Bacteroidota
GCA
Cys
>WENV183542292
OOAM01001673
338132
Bacteroidota
GCA
Cys
>WENV183541973
OOAM01000344
338132
Bacteroidota
GCA
Cys
>WENV183541954
OOAM01000290
338132
Bacteroidota
GCA
Cys
>WENV183541900
OOAM01000206
338132
Bacteroidota
GCA
Cys
>WENV183541839
OOAM01000122
338132
Bacteroidota
GCA
Cys
>WENV183541838
OOAM01000122
338132
Bacteroidota
GCA
Cys
>WENV183542604
OOAM01009721
144688
Bacteroidota
CAT
Met
>WENV183542049
OOAM01000502
45423
Bacteroidota
TGA
Ser
>WENV183541860
OOAM01000144
58714
Bacteroidota
CAA
Leu
>WENV183542131
OOAM01000787
144933
Bacteroidota
TCT
Arg
>WENV183541848
OOAM01000128
149691
Bacteroidota
GTT
Asn
>WENV183542490
OOAM01005091
144656
Bacteroidota
GTG
His
>WENV183542206
OOAM01001098
235207
Bacteroidota
CAT
Met
>WENV183542085
OOAM01000633
235207
Bacteroidota
CAT
Met
>WENV183541861
OOAM01000145
235207
Bacteroidota
CAT
Met
>WENV183541842
OOAM01000125
144659
Bacteroidota
GTG
His
>WENV183541886
OOAM01000185
235180
Bacteroidota
CCA
Trp
>WENV183542588
OOAM01008885
144596
Bacteroidota
GGC
Ala
>WENV183541955
OOAM01000295
80607
Bacteroidota
GTA
Tyr
>WENV183542658
OOAM01014785
113604
Bacteroidota
>WENV183541841
OOAM01000125
80614
Bacteroidota
>WENV183542392
OOAM01003084
144590
Bacteroidota
GTT
Asn
>WENV183542677
OOAM01016384
95559
Bacteroidota
TAG
Leu
>WENV183542459
OOAM01004148
95559
Bacteroidota
TAG
Leu
>WENV183542348
OOAM01002448
419272
Bacteroidota
CTG
Gln
>WENV183542415
OOAM01003443
144655
Bacteroidota
GGC
Ala
>WENV183541770
OOAM01000023
338164
Bacteroidota
TTC
Glu
>WENV183541966
OOAM01000334
95875
Bacteroidota
TAG
Leu
>WENV183541735
OOAM01000007
240012
Bacteroidota
CCC
Gly
>WENV183541968
OOAM01000339
44852
Bacteroidota
TAA
Leu
>WENV183541928
OOAM01000230
44852
Bacteroidota
TAA
Leu
>WENV183541736
OOAM01000007
147439
Bacteroidota
TCT
Arg
>WENV183542323
OOAM01002003
150485
Bacteroidota
GTT
Asn
>WENV183541992
OOAM01000377
150485
Bacteroidota
GTT
Asn
>WENV183541760
OOAM01000015
411550
Bacteroidota
CTG
Gln
>WENV183541972
OOAM01000344
23696
Bacteroidota
GCT
Ser
>WENV183541893
OOAM01000189
16224
Bacteroidota
GGA
Ser
>WENV183542370
OOAM01002781
338125
Bacteroidota
CCT
Arg
>WENV183541792
OOAM01000057
338125
Bacteroidota
CCT
Arg
>WENV183541730
OOAM01000005
235129
Bacteroidota
GCC
Gly
>WENV183542081
OOAM01000612
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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