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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183550185
OOBB01000476
235097
Bacteroidota
TTT
Lys
>WENV183550076
OOBB01000159
95987
Bacteroidota
CAA
Leu
>WENV183550113
OOBB01000224
95987
Bacteroidota
CAA
Leu
>WENV183550138
OOBB01000290
95987
Bacteroidota
CAA
Leu
>WENV183550153
OOBB01000325
339412
Bacteroidota
GGT
Thr
>WENV183550147
OOBB01000309
267954
Bacteroidota
GCC
Gly
>WENV183550291
OOBB01001087
267954
Bacteroidota
GCC
Gly
>WENV183550532
OOBB01013226
267954
Bacteroidota
GCC
Gly
>WENV183549937
OOBB01000005
237796
Bacteroidota
CGT
Thr
>WENV183550621
OOBB01034510
126966
Bacteroidota
TAC
Val
>WENV183550117
OOBB01000230
97336
Bacteroidota
CAG
Leu
>WENV183550494
OOBB01008239
126965
Bacteroidota
GGG
Pro
>WENV183550391
OOBB01003270
48053
Bacteroidota
TGA
Ser
>WENV183550092
OOBB01000180
48053
Bacteroidota
TGA
Ser
>WENV183550036
OOBB01000074
413663
Bacteroidota
CTG
Gln
>WENV183550035
OOBB01000074
413663
Bacteroidota
CTG
Gln
>WENV183550196
OOBB01000543
413663
Bacteroidota
CTG
Gln
>WENV183550051
OOBB01000115
413663
Bacteroidota
CTG
Gln
>WENV183550050
OOBB01000115
413663
Bacteroidota
CTG
Gln
>WENV183550205
OOBB01000603
237797
Bacteroidota
CCA
Trp
>WENV183550157
OOBB01000339
144695
Bacteroidota
CAT
Met
>WENV183550101
OOBB01000198
412479
Bacteroidota
TTG
Gln
>WENV183550230
OOBB01000700
147147
Bacteroidota
GTG
His
>WENV183550106
OOBB01000212
147147
Bacteroidota
GTG
His
>WENV183550105
OOBB01000212
147147
Bacteroidota
GTG
His
>WENV183550030
OOBB01000068
147147
Bacteroidota
GTG
His
>WENV183550029
OOBB01000068
147147
Bacteroidota
GTG
His
>WENV183550357
OOBB01002239
155123
Bacteroidota
GTT
Asn
>WENV183550356
OOBB01002239
155123
Bacteroidota
GTT
Asn
>WENV183550125
OOBB01000250
155123
Bacteroidota
GTT
Asn
>WENV183550025
OOBB01000066
338132
Bacteroidota
GCA
Cys
>WENV183549986
OOBB01000028
238810
Bacteroidota
CGG
Pro
>WENV183550279
OOBB01001027
46489
Bacteroidota
TGA
Ser
>WENV183550096
OOBB01000193
46489
Bacteroidota
TGA
Ser
>WENV183549977
OOBB01000024
37076
Bacteroidota
TAA
Leu
>WENV183550251
OOBB01000796
37076
Bacteroidota
TAA
Leu
>WENV183550137
OOBB01000284
37076
Bacteroidota
TAA
Leu
>WENV183550062
OOBB01000133
37076
Bacteroidota
TAA
Leu
>WENV183550288
OOBB01001077
144656
Bacteroidota
GTG
His
>WENV183550210
OOBB01000616
235207
Bacteroidota
CAT
Met
>WENV183550161
OOBB01000350
344769
Bacteroidota
CTC
Glu
>WENV183550160
OOBB01000350
344769
Bacteroidota
CTC
Glu
>WENV183550094
OOBB01000184
344769
Bacteroidota
CTC
Glu
>WENV183550221
OOBB01000641
415558
Bacteroidota
TTG
Gln
>WENV183550250
OOBB01000795
44852
Bacteroidota
TAA
Leu
>WENV183550123
OOBB01000247
44852
Bacteroidota
TAA
Leu
>WENV183550007
OOBB01000047
150485
Bacteroidota
GTT
Asn
>WENV183550006
OOBB01000047
150485
Bacteroidota
GTT
Asn
>WENV183550005
OOBB01000047
150485
Bacteroidota
GTT
Asn
>WENV183550273
OOBB01000931
132360
Bacteroidota
GGG
Pro
>WENV183550167
OOBB01000367
132360
Bacteroidota
GGG
Pro
>WENV183550121
OOBB01000235
132360
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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