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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183559003
OOBS01000001
48053
Bacteroidota
TGA
Ser
>WENV183559005
OOBS01000001
338132
Bacteroidota
GCA
Cys
>WENV183559004
OOBS01000001
338132
Bacteroidota
GCA
Cys
>WENV183559011
OOBS01000003
339412
Bacteroidota
GGT
Thr
>WENV183559012
OOBS01000003
237797
Bacteroidota
CCA
Trp
>WENV183559008
OOBS01000003
238810
Bacteroidota
CGG
Pro
>WENV183559007
OOBS01000003
415558
Bacteroidota
TTG
Gln
>WENV183559023
OOBS01000007
237796
Bacteroidota
CGT
Thr
>WENV183559030
OOBS01000012
37076
Bacteroidota
TAA
Leu
>WENV183559027
OOBS01000012
415558
Bacteroidota
TTG
Gln
>WENV183559032
OOBS01000014
147147
Bacteroidota
GTG
His
>WENV183559031
OOBS01000014
147147
Bacteroidota
GTG
His
>WENV183559033
OOBS01000015
48053
Bacteroidota
TGA
Ser
>WENV183559038
OOBS01000017
147147
Bacteroidota
GTG
His
>WENV183559044
OOBS01000021
150485
Bacteroidota
GTT
Asn
>WENV183559043
OOBS01000021
150485
Bacteroidota
GTT
Asn
>WENV183559050
OOBS01000027
37076
Bacteroidota
TAA
Leu
>WENV183559062
OOBS01000045
413663
Bacteroidota
CTG
Gln
>WENV183559061
OOBS01000045
413663
Bacteroidota
CTG
Gln
>WENV183559069
OOBS01000047
132360
Bacteroidota
GGG
Pro
>WENV183559086
OOBS01000074
235207
Bacteroidota
CAT
Met
>WENV183559085
OOBS01000074
235207
Bacteroidota
CAT
Met
>WENV183559089
OOBS01000079
97336
Bacteroidota
CAG
Leu
>WENV183559100
OOBS01000094
412479
Bacteroidota
TTG
Gln
>WENV183559105
OOBS01000101
235207
Bacteroidota
CAT
Met
>WENV183559111
OOBS01000106
344769
Bacteroidota
CTC
Glu
>WENV183559110
OOBS01000106
344769
Bacteroidota
CTC
Glu
>WENV183559121
OOBS01000120
44852
Bacteroidota
TAA
Leu
>WENV183559132
OOBS01000148
95987
Bacteroidota
CAA
Leu
>WENV183559138
OOBS01000161
37076
Bacteroidota
TAA
Leu
>WENV183559142
OOBS01000178
237796
Bacteroidota
CGT
Thr
>WENV183559145
OOBS01000183
150485
Bacteroidota
GTT
Asn
>WENV183559152
OOBS01000204
150485
Bacteroidota
GTT
Asn
>WENV183559190
OOBS01000449
251266
Bacteroidota
CTT
Lys
>WENV183559195
OOBS01000498
338124
Bacteroidota
CCG
Arg
>WENV183559211
OOBS01000761
144590
Bacteroidota
GTT
Asn
>WENV183559220
OOBS01000807
344769
Bacteroidota
CTC
Glu
>WENV183559240
OOBS01000944
113604
Bacteroidota
>WENV183559243
OOBS01001010
132360
Bacteroidota
GGG
Pro
>WENV183559259
OOBS01001216
48053
Bacteroidota
TGA
Ser
>WENV183559262
OOBS01001272
415410
Bacteroidota
TTG
Gln
>WENV183559287
OOBS01001452
344769
Bacteroidota
CTC
Glu
>WENV183559300
OOBS01001669
338125
Bacteroidota
CCT
Arg
>WENV183559307
OOBS01001934
419272
Bacteroidota
CTG
Gln
>WENV183559308
OOBS01001965
95987
Bacteroidota
CAA
Leu
>WENV183559329
OOBS01002708
150485
Bacteroidota
GTT
Asn
>WENV183559340
OOBS01002939
48053
Bacteroidota
TGA
Ser
>WENV183559354
OOBS01004230
238810
Bacteroidota
CGG
Pro
>WENV183559395
OOBS01005461
80607
Bacteroidota
GTA
Tyr
>WENV183559410
OOBS01007090
338132
Bacteroidota
GCA
Cys
>WENV183559420
OOBS01008343
353927
Bacteroidota
TTC
Glu
>WENV183559505
OOBS01023260
235102
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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