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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183578041
OOCL01000001
235097
Bacteroidota
TTT
Lys
>WENV183578507
OOCL01001518
235097
Bacteroidota
TTT
Lys
>WENV183578613
OOCL01004016
235097
Bacteroidota
TTT
Lys
>WENV183578450
OOCL01001000
235102
Bacteroidota
CGT
Thr
>WENV183578061
OOCL01000003
267954
Bacteroidota
GCC
Gly
>WENV183578160
OOCL01000062
267954
Bacteroidota
GCC
Gly
>WENV183578710
OOCL01008354
146761
Bacteroidota
GAT
Ile
>WENV183578114
OOCL01000023
126966
Bacteroidota
TAC
Val
>WENV183578263
OOCL01000221
338155
Bacteroidota
CTC
Glu
>WENV183578040
OOCL01000001
126965
Bacteroidota
GGG
Pro
>WENV183578634
OOCL01004582
150845
Bacteroidota
GTC
Asp
>WENV183578151
OOCL01000058
24174
Bacteroidota
GCT
Ser
>WENV183578614
OOCL01004038
338486
Bacteroidota
CAT
Met
>WENV183578549
OOCL01002009
48053
Bacteroidota
TGA
Ser
>WENV183578413
OOCL01000757
48053
Bacteroidota
TGA
Ser
>WENV183578285
OOCL01000286
48053
Bacteroidota
TGA
Ser
>WENV183578125
OOCL01000028
48053
Bacteroidota
TGA
Ser
>WENV183578400
OOCL01000683
415410
Bacteroidota
TTG
Gln
>WENV183578278
OOCL01000263
415410
Bacteroidota
TTG
Gln
>WENV183578243
OOCL01000180
415410
Bacteroidota
TTG
Gln
>WENV183578660
OOCL01005337
59689
Bacteroidota
CAG
Leu
>WENV183578081
OOCL01000010
155123
Bacteroidota
GTT
Asn
>WENV183578298
OOCL01000321
338124
Bacteroidota
CCG
Arg
>WENV183578220
OOCL01000143
338124
Bacteroidota
CCG
Arg
>WENV183578690
OOCL01007239
238121
Bacteroidota
CTT
Lys
>WENV183578453
OOCL01001075
338132
Bacteroidota
GCA
Cys
>WENV183578382
OOCL01000583
338132
Bacteroidota
GCA
Cys
>WENV183578165
OOCL01000064
338132
Bacteroidota
GCA
Cys
>WENV183578146
OOCL01000052
338132
Bacteroidota
GCA
Cys
>WENV183578691
OOCL01007239
45423
Bacteroidota
TGA
Ser
>WENV183578559
OOCL01002402
144933
Bacteroidota
TCT
Arg
>WENV183578231
OOCL01000167
144656
Bacteroidota
GTG
His
>WENV183578112
OOCL01000020
144656
Bacteroidota
GTG
His
>WENV183578202
OOCL01000115
235207
Bacteroidota
CAT
Met
>WENV183578200
OOCL01000110
235207
Bacteroidota
CAT
Met
>WENV183578599
OOCL01003428
144659
Bacteroidota
GTG
His
>WENV183578316
OOCL01000387
144596
Bacteroidota
GGC
Ala
>WENV183578335
OOCL01000443
80607
Bacteroidota
GTA
Tyr
>WENV183578128
OOCL01000031
80607
Bacteroidota
GTA
Tyr
>WENV183578496
OOCL01001446
80614
Bacteroidota
>WENV183578198
OOCL01000101
95559
Bacteroidota
TAG
Leu
>WENV183578255
OOCL01000204
419272
Bacteroidota
CTG
Gln
>WENV183578161
OOCL01000062
44852
Bacteroidota
TAA
Leu
>WENV183578148
OOCL01000053
44852
Bacteroidota
TAA
Leu
>WENV183578142
OOCL01000043
44852
Bacteroidota
TAA
Leu
>WENV183578802
OOCL01018924
147439
Bacteroidota
TCT
Arg
>WENV183578669
OOCL01005682
150485
Bacteroidota
GTT
Asn
>WENV183578551
OOCL01002081
132360
Bacteroidota
GGG
Pro
>WENV183578452
OOCL01001067
132360
Bacteroidota
GGG
Pro
>WENV183578834
OOCL01024939
353927
Bacteroidota
TTC
Glu
>WENV183578262
OOCL01000221
23696
Bacteroidota
GCT
Ser
>WENV183578503
OOCL01001514
16224
Bacteroidota
GGA
Ser
>WENV183578256
OOCL01000204
16220
Bacteroidota
GGA
Ser
>WENV183578189
OOCL01000086
338125
Bacteroidota
CCT
Arg
>WENV183578596
OOCL01003249
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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