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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183581404
OOCO01000003
147147
Bacteroidota
GTG
His
>WENV183581403
OOCO01000003
147147
Bacteroidota
GTG
His
>WENV183581408
OOCO01000004
412479
Bacteroidota
TTG
Gln
>WENV183581409
OOCO01000004
37076
Bacteroidota
TAA
Leu
>WENV183581411
OOCO01000005
413663
Bacteroidota
CTG
Gln
>WENV183581412
OOCO01000005
413663
Bacteroidota
CTG
Gln
>WENV183581415
OOCO01000008
196394
Bacteroidota
GTC
Asp
>WENV183581414
OOCO01000008
196394
Bacteroidota
GTC
Asp
>WENV183581413
OOCO01000008
196394
Bacteroidota
GTC
Asp
>WENV183581420
OOCO01000009
95987
Bacteroidota
CAA
Leu
>WENV183581440
OOCO01000038
339412
Bacteroidota
GGT
Thr
>WENV183581441
OOCO01000038
237797
Bacteroidota
CCA
Trp
>WENV183581453
OOCO01000086
175704
Bacteroidota
TGC
Ala
>WENV183581458
OOCO01000100
136244
Bacteroidota
TAC
Val
>WENV183581459
OOCO01000100
136244
Bacteroidota
TAC
Val
>WENV183581462
OOCO01000107
344769
Bacteroidota
CTC
Glu
>WENV183581461
OOCO01000107
344769
Bacteroidota
CTC
Glu
>WENV183581490
OOCO01000446
151960
Bacteroidota
GGC
Ala
>WENV183581509
OOCO01000884
17323
Bacteroidota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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