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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
77 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183599157
OODG01040474
235102
Bacteroidota
CGT
Thr
>WENV183598797
OODG01005725
267954
Bacteroidota
GCC
Gly
>WENV183598924
OODG01009753
267954
Bacteroidota
GCC
Gly
>WENV183598822
OODG01006306
144657
Bacteroidota
CGG
Pro
>WENV183598487
OODG01001488
243025
Bacteroidota
CAT
Met
>WENV183598569
OODG01002227
243025
Bacteroidota
CAT
Met
>WENV183598889
OODG01008318
338155
Bacteroidota
CTC
Glu
>WENV183599092
OODG01023830
153993
Bacteroidota
GAT
Ile
>WENV183599006
OODG01014061
343138
Bacteroidota
CCT
Arg
>WENV183598629
OODG01003176
58715
Bacteroidota
GAG
Leu
>WENV183598974
OODG01012338
46165
Bacteroidota
TGA
Ser
>WENV183598760
OODG01005427
46165
Bacteroidota
TGA
Ser
>WENV183598639
OODG01003340
46165
Bacteroidota
TGA
Ser
>WENV183598829
OODG01006402
17323
Bacteroidota
GGA
Ser
>WENV183598511
OODG01001626
17323
Bacteroidota
GGA
Ser
>WENV183599037
OODG01017130
338486
Bacteroidota
CAT
Met
>WENV183598354
OODG01000775
48053
Bacteroidota
TGA
Ser
>WENV183598221
OODG01000343
48053
Bacteroidota
TGA
Ser
>WENV183598372
OODG01000840
415410
Bacteroidota
TTG
Gln
>WENV183598200
OODG01000278
415410
Bacteroidota
TTG
Gln
>WENV183599026
OODG01015762
59689
Bacteroidota
CAG
Leu
>WENV183599046
OODG01018262
155123
Bacteroidota
GTT
Asn
>WENV183598702
OODG01004225
344692
Bacteroidota
GGT
Thr
>WENV183598122
OODG01000084
145504
Bacteroidota
TGT
Thr
>WENV183598858
OODG01007323
341950
Bacteroidota
>WENV183598202
OODG01000281
341950
Bacteroidota
>WENV183598949
OODG01011199
338124
Bacteroidota
CCG
Arg
>WENV183598838
OODG01006915
238121
Bacteroidota
CTT
Lys
>WENV183598855
OODG01007296
126641
Bacteroidota
TAC
Val
>WENV183598866
OODG01007536
338132
Bacteroidota
GCA
Cys
>WENV183598728
OODG01004959
338132
Bacteroidota
GCA
Cys
>WENV183598708
OODG01004410
338132
Bacteroidota
GCA
Cys
>WENV183598358
OODG01000784
338132
Bacteroidota
GCA
Cys
>WENV183598388
OODG01000980
144933
Bacteroidota
TCT
Arg
>WENV183598723
OODG01004824
144933
Bacteroidota
TCT
Arg
>WENV183598141
OODG01000114
171336
Bacteroidota
GGC
Ala
>WENV183598482
OODG01001458
144656
Bacteroidota
GTG
His
>WENV183598502
OODG01001547
235207
Bacteroidota
CAT
Met
>WENV183599019
OODG01015427
235180
Bacteroidota
CCA
Trp
>WENV183598475
OODG01001416
144596
Bacteroidota
GGC
Ala
>WENV183598572
OODG01002328
80607
Bacteroidota
GTA
Tyr
>WENV183598466
OODG01001338
80607
Bacteroidota
GTA
Tyr
>WENV183598333
OODG01000726
80607
Bacteroidota
GTA
Tyr
>WENV183598168
OODG01000181
80607
Bacteroidota
GTA
Tyr
>WENV183598851
OODG01007228
80614
Bacteroidota
>WENV183599077
OODG01020990
154643
Bacteroidota
CAT
Met
>WENV183598213
OODG01000311
154643
Bacteroidota
CAT
Met
>WENV183598749
OODG01005271
144590
Bacteroidota
GTT
Asn
>WENV183598748
OODG01005271
144590
Bacteroidota
GTT
Asn
>WENV183598998
OODG01013519
95559
Bacteroidota
TAG
Leu
>WENV183598756
OODG01005381
419272
Bacteroidota
CTG
Gln
>WENV183598607
OODG01002854
144655
Bacteroidota
GGC
Ala
>WENV183598634
OODG01003280
144639
Bacteroidota
GGC
Ala
>WENV183599094
OODG01024245
338164
Bacteroidota
TTC
Glu
>WENV183598921
OODG01009682
95875
Bacteroidota
TAG
Leu
>WENV183599031
OODG01016016
240012
Bacteroidota
CCC
Gly
>WENV183598698
OODG01004193
44852
Bacteroidota
TAA
Leu
>WENV183598170
OODG01000182
44852
Bacteroidota
TAA
Leu
>WENV183598731
OODG01005024
132360
Bacteroidota
GGG
Pro
>WENV183598707
OODG01004381
132360
Bacteroidota
GGG
Pro
>WENV183598586
OODG01002553
132360
Bacteroidota
GGG
Pro
>WENV183598130
OODG01000095
132360
Bacteroidota
GGG
Pro
>WENV183598115
OODG01000070
132360
Bacteroidota
GGG
Pro
>WENV183598865
OODG01007447
239647
Bacteroidota
TTT
Lys
>WENV183598918
OODG01009616
353927
Bacteroidota
TTC
Glu
>WENV183598857
OODG01007321
353927
Bacteroidota
TTC
Glu
>WENV183598564
OODG01002192
353927
Bacteroidota
TTC
Glu
>WENV183599135
OODG01034904
146530
Bacteroidota
TGT
Thr
>WENV183598888
OODG01008318
23696
Bacteroidota
GCT
Ser
>WENV183598582
OODG01002500
414426
Bacteroidota
CTG
Gln
>WENV183598368
OODG01000825
414426
Bacteroidota
CTG
Gln
>WENV183598922
OODG01009689
48914
Bacteroidota
TGA
Ser
>WENV183598217
OODG01000329
48914
Bacteroidota
TGA
Ser
>WENV183598581
OODG01002487
16224
Bacteroidota
GGA
Ser
>WENV183599023
OODG01015629
151960
Bacteroidota
GGC
Ala
>WENV183598706
OODG01004373
151960
Bacteroidota
GGC
Ala
>WENV183598986
OODG01012741
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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