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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183624395
OOGD01005749
172532
Bacteroidota
GTC
Asp
>WENV183624541
OOGD01035557
147106
Bacteroidota
CAT
Met
>WENV183624601
OOGD01059694
100198
Bacteroidota
TAG
Leu
>WENV183624453
OOGD01012542
338625
Bacteroidota
TTC
Glu
>WENV183624525
OOGD01027424
161504
Bacteroidota
TGC
Ala
>WENV183624441
OOGD01010562
150103
Bacteroidota
GTG
His
>WENV183624542
OOGD01035827
150103
Bacteroidota
GTG
His
>WENV183624488
OOGD01019436
238764
Bacteroidota
>WENV183624557
OOGD01041257
235802
Bacteroidota
CAT
Met
>WENV183624590
OOGD01055488
152188
Bacteroidota
GGC
Ala
>WENV183624470
OOGD01016261
113694
Bacteroidota
GTA
Tyr
>WENV183624514
OOGD01024907
148047
Bacteroidota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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