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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183625540
OOGG01000088
284409
Bacteroidota
CAT
Met
>WENV183625569
OOGG01001080
177083
Bacteroidota
TGT
Thr
>WENV183625599
OOGG01002962
289409
Bacteroidota
TCC
Gly
>WENV183625602
OOGG01003193
156605
Bacteroidota
GAC
Val
>WENV183625616
OOGG01003925
172063
Bacteroidota
TAC
Val
>WENV183625619
OOGG01004016
399285
Bacteroidota
TTC
Glu
>WENV183625636
OOGG01004845
182371
Bacteroidota
CAT
Met
>WENV183625658
OOGG01006138
206043
Bacteroidota
GTC
Asp
>WENV183625706
OOGG01011435
162868
Bacteroidota
TAC
Val
>WENV183625726
OOGG01014619
402532
Bacteroidota
GCC
Gly
>WENV183625772
OOGG01025558
281130
Bacteroidota
GAA
Phe
>WENV183625787
OOGG01029686
402090
Bacteroidota
TTG
Gln
>WENV183625799
OOGG01032740
399343
Bacteroidota
TTC
Glu
>WENV183625802
OOGG01033573
64185
Bacteroidota
TGA
Ser
>WENV183625822
OOGG01042810
289409
Bacteroidota
TCC
Gly
>WENV183625825
OOGG01044637
365088
Bacteroidota
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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