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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183630250
OOGS01000363
399343
Bacteroidota
TTC
Glu
>WENV183630283
OOGS01001094
120026
Bacteroidota
GTA
Tyr
>WENV183630285
OOGS01001094
448583
Bacteroidota
GGT
Thr
>WENV183630313
OOGS01002955
296664
Bacteroidota
GAA
Phe
>WENV183630315
OOGS01003122
206043
Bacteroidota
GTC
Asp
>WENV183630341
OOGS01004622
155786
Bacteroidota
TGG
Pro
>WENV183630420
OOGS01012001
402090
Bacteroidota
TTG
Gln
>WENV183630434
OOGS01014453
176863
Bacteroidota
CAT
Met
>WENV183630445
OOGS01016395
460957
Bacteroidota
GCC
Gly
>WENV183630500
OOGS01026267
156424
Bacteroidota
TGG
Pro
>WENV183630565
OOGS01044182
56162
Bacteroidota
TGA
Ser
>WENV183630590
OOGS01052409
176699
Bacteroidota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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