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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183630799
OOGU01002776
21872
Bacteroidota
GGA
Ser
>WENV183630839
OOGU01004234
295349
Bacteroidota
CCA
Trp
>WENV183630916
OOGU01008748
155807
Bacteroidota
GAC
Val
>WENV183631038
OOGU01020768
223263
Bacteroidota
GTT
Asn
>WENV183631154
OOGU01042269
178179
Bacteroidota
GGC
Ala
>WENV183631173
OOGU01044863
156756
Bacteroidota
TGG
Pro
>WENV183631229
OOGU01055398
177083
Bacteroidota
TGT
Thr
>WENV183631230
OOGU01055398
120026
Bacteroidota
GTA
Tyr
>WENV183631348
OOGU01085861
402532
Bacteroidota
GCC
Gly
>WENV183631394
OOGU01098821
156424
Bacteroidota
TGG
Pro
>WENV183631446
OOGU01116306
193718
Bacteroidota
GTC
Asp
>WENV183631453
OOGU01117278
400818
Bacteroidota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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