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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183646118
OQVR01000078
118221
Bacteroidota
CAA
Leu
>WENV183646121
OQVR01000089
191205
Bacteroidota
TGG
Pro
>WENV183646170
OQVR01000280
178134
Bacteroidota
TGG
Pro
>WENV183646169
OQVR01000280
481045
Bacteroidota
CCC
Gly
>WENV183646186
OQVR01000356
179697
Bacteroidota
TGT
Thr
>WENV183646223
OQVR01000486
172085
Bacteroidota
TAC
Val
>WENV183646227
OQVR01000533
46648
Bacteroidota
TAA
Leu
>WENV183646258
OQVR01000754
242241
Bacteroidota
GTC
Asp
>WENV183646276
OQVR01000911
404109
Bacteroidota
CTC
Glu
>WENV183646281
OQVR01000934
118221
Bacteroidota
CAA
Leu
>WENV183646360
OQVR01001781
172085
Bacteroidota
TAC
Val
>WENV183646366
OQVR01001812
56385
Bacteroidota
TGA
Ser
>WENV183646466
OQVR01003333
175944
Bacteroidota
CAT
Met
>WENV183646479
OQVR01003687
172085
Bacteroidota
TAC
Val
>WENV183646533
OQVR01005033
491385
Bacteroidota
TTG
Gln
>WENV183646640
OQVR01008704
201819
Bacteroidota
CAT
Met
>WENV183646734
OQVR01012675
242241
Bacteroidota
GTC
Asp
>WENV183646733
OQVR01012675
187814
Bacteroidota
GTC
Asp
>WENV183646764
OQVR01013848
118221
Bacteroidota
CAA
Leu
>WENV183646765
OQVR01014125
118221
Bacteroidota
CAA
Leu
>WENV183646785
OQVR01015108
312035
Bacteroidota
CCA
Trp
>WENV183646802
OQVR01016272
481328
Bacteroidota
TTG
Gln
>WENV183646807
OQVR01016638
174201
Bacteroidota
GGG
Pro
>WENV183647086
OQVR01055443
156128
Bacteroidota
GGG
Pro
>WENV183647131
OQVR01067071
115044
Bacteroidota
GTA
Tyr
>WENV183647141
OQVR01071458
215303
Bacteroidota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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