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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
87 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183722911
PDYJ01000002
341950
Bacteroidota
>WENV183722912
PDYJ01000002
341950
Bacteroidota
>WENV183722934
PDYJ01000002
144639
Bacteroidota
GGC
Ala
>WENV183722916
PDYJ01000002
263771
Bacteroidota
CTT
Lys
>WENV183722979
PDYJ01000004
126966
Bacteroidota
TAC
Val
>WENV183722980
PDYJ01000004
126966
Bacteroidota
TAC
Val
>WENV183722981
PDYJ01000004
126966
Bacteroidota
TAC
Val
>WENV183723001
PDYJ01000013
353927
Bacteroidota
TTC
Glu
>WENV183723000
PDYJ01000013
353927
Bacteroidota
TTC
Glu
>WENV183723027
PDYJ01000058
243025
Bacteroidota
CAT
Met
>WENV183723053
PDYJ01000075
144639
Bacteroidota
GGC
Ala
>WENV183723066
PDYJ01000141
235203
Bacteroidota
TTT
Lys
>WENV183723071
PDYJ01000194
144639
Bacteroidota
GGC
Ala
>WENV183723080
PDYJ01000259
136207
Bacteroidota
TAC
Val
>WENV183723079
PDYJ01000259
136207
Bacteroidota
TAC
Val
>WENV183723082
PDYJ01000279
151121
Bacteroidota
CAT
Met
>WENV183723121
PDYJ01000763
267954
Bacteroidota
GCC
Gly
>WENV183723122
PDYJ01000763
267954
Bacteroidota
GCC
Gly
>WENV183723130
PDYJ01000763
155123
Bacteroidota
GTT
Asn
>WENV183723131
PDYJ01000763
235203
Bacteroidota
TTT
Lys
>WENV183723113
PDYJ01000763
151121
Bacteroidota
CAT
Met
>WENV183723120
PDYJ01000763
240012
Bacteroidota
CCC
Gly
>WENV183723198
PDYJ01000766
155123
Bacteroidota
GTT
Asn
>WENV183723199
PDYJ01000766
155123
Bacteroidota
GTT
Asn
>WENV183723196
PDYJ01000766
169357
Bacteroidota
CAT
Met
>WENV183723190
PDYJ01000766
136207
Bacteroidota
TAC
Val
>WENV183723189
PDYJ01000766
136207
Bacteroidota
TAC
Val
>WENV183723191
PDYJ01000766
144639
Bacteroidota
GGC
Ala
>WENV183723225
PDYJ01000788
267954
Bacteroidota
GCC
Gly
>WENV183723226
PDYJ01000788
267954
Bacteroidota
GCC
Gly
>WENV183723228
PDYJ01000788
267954
Bacteroidota
GCC
Gly
>WENV183723229
PDYJ01000788
267954
Bacteroidota
GCC
Gly
>WENV183723242
PDYJ01000801
155123
Bacteroidota
GTT
Asn
>WENV183723243
PDYJ01000801
155123
Bacteroidota
GTT
Asn
>WENV183723265
PDYJ01000857
263771
Bacteroidota
CTT
Lys
>WENV183723366
PDYJ01001531
267954
Bacteroidota
GCC
Gly
>WENV183723367
PDYJ01001531
267954
Bacteroidota
GCC
Gly
>WENV183723380
PDYJ01001531
267954
Bacteroidota
GCC
Gly
>WENV183723374
PDYJ01001531
155123
Bacteroidota
GTT
Asn
>WENV183723375
PDYJ01001531
155123
Bacteroidota
GTT
Asn
>WENV183723376
PDYJ01001531
235203
Bacteroidota
TTT
Lys
>WENV183723385
PDYJ01001532
240012
Bacteroidota
CCC
Gly
>WENV183723399
PDYJ01001533
235203
Bacteroidota
TTT
Lys
>WENV183723429
PDYJ01001565
171336
Bacteroidota
GGC
Ala
>WENV183723441
PDYJ01001618
155123
Bacteroidota
GTT
Asn
>WENV183723442
PDYJ01001618
155123
Bacteroidota
GTT
Asn
>WENV183723440
PDYJ01001618
235203
Bacteroidota
TTT
Lys
>WENV183723447
PDYJ01001643
353927
Bacteroidota
TTC
Glu
>WENV183723446
PDYJ01001643
353927
Bacteroidota
TTC
Glu
>WENV183723503
PDYJ01001928
144639
Bacteroidota
GGC
Ala
>WENV183723530
PDYJ01002302
155123
Bacteroidota
GTT
Asn
>WENV183723531
PDYJ01002302
155123
Bacteroidota
GTT
Asn
>WENV183723527
PDYJ01002302
169357
Bacteroidota
CAT
Met
>WENV183723513
PDYJ01002302
144639
Bacteroidota
GGC
Ala
>WENV183723552
PDYJ01002303
341950
Bacteroidota
>WENV183723553
PDYJ01002303
341950
Bacteroidota
>WENV183723562
PDYJ01002303
235203
Bacteroidota
TTT
Lys
>WENV183723594
PDYJ01002306
267954
Bacteroidota
GCC
Gly
>WENV183723595
PDYJ01002306
267954
Bacteroidota
GCC
Gly
>WENV183723597
PDYJ01002306
267954
Bacteroidota
GCC
Gly
>WENV183723598
PDYJ01002306
267954
Bacteroidota
GCC
Gly
>WENV183723578
PDYJ01002306
126966
Bacteroidota
TAC
Val
>WENV183723579
PDYJ01002306
126966
Bacteroidota
TAC
Val
>WENV183723605
PDYJ01002307
155123
Bacteroidota
GTT
Asn
>WENV183723606
PDYJ01002307
155123
Bacteroidota
GTT
Asn
>WENV183723608
PDYJ01002307
155123
Bacteroidota
GTT
Asn
>WENV183723609
PDYJ01002307
235203
Bacteroidota
TTT
Lys
>WENV183723607
PDYJ01002307
235203
Bacteroidota
TTT
Lys
>WENV183723615
PDYJ01002310
235203
Bacteroidota
TTT
Lys
>WENV183723625
PDYJ01002346
267954
Bacteroidota
GCC
Gly
>WENV183723629
PDYJ01002373
144639
Bacteroidota
GGC
Ala
>WENV183723655
PDYJ01002592
235203
Bacteroidota
TTT
Lys
>WENV183723657
PDYJ01002626
341950
Bacteroidota
>WENV183723658
PDYJ01002626
341950
Bacteroidota
>WENV183723663
PDYJ01002722
155123
Bacteroidota
GTT
Asn
>WENV183723664
PDYJ01002722
155123
Bacteroidota
GTT
Asn
>WENV183723665
PDYJ01002722
235203
Bacteroidota
TTT
Lys
>WENV183723673
PDYJ01003082
168744
Bacteroidota
GTG
His
>WENV183723680
PDYJ01003082
240012
Bacteroidota
CCC
Gly
>WENV183723704
PDYJ01003084
235203
Bacteroidota
TTT
Lys
>WENV183723718
PDYJ01003085
341950
Bacteroidota
>WENV183723719
PDYJ01003085
341950
Bacteroidota
>WENV183723733
PDYJ01003090
267954
Bacteroidota
GCC
Gly
>WENV183723734
PDYJ01003090
267954
Bacteroidota
GCC
Gly
>WENV183723737
PDYJ01003090
267954
Bacteroidota
GCC
Gly
>WENV183723771
PDYJ01003122
136207
Bacteroidota
TAC
Val
>WENV183723807
PDYJ01003536
235203
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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