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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183730078
PJTR01000541
12427
Betaproteobacteria
GCT
Ser
>WENV183730098
PJTR01000618
467771
Betaproteobacteria
GGT
Thr
>WENV183730096
PJTR01000618
73415
Betaproteobacteria
GTA
Tyr
>WENV183730099
PJTR01000664
178141
Betaproteobacteria
CAT
Met
>WENV183730100
PJTR01000670
371259
Betaproteobacteria
TAC
Val
>WENV183730113
PJTR01000787
366114
Betaproteobacteria
TTT
Lys
>WENV183730131
PJTR01001075
183734
Betaproteobacteria
TCT
Arg
>WENV183730135
PJTR01001137
177009
Betaproteobacteria
GGG
Pro
>WENV183730145
PJTR01001300
283938
Betaproteobacteria
CGT
Thr
>WENV183730168
PJTR01001781
235235
Betaproteobacteria
>WENV183730169
PJTR01001950
283941
Betaproteobacteria
CTT
Lys
>WENV183730170
PJTR01001950
283941
Betaproteobacteria
CTT
Lys
>WENV183730181
PJTR01002373
76492
Betaproteobacteria
TAA
Leu
>WENV183730192
PJTR01002918
284214
Betaproteobacteria
TAC
Val
>WENV183730198
PJTR01003215
282862
Betaproteobacteria
TGC
Ala
>WENV183730206
PJTR01004599
283937
Betaproteobacteria
GCC
Gly
>WENV183730252
PJTR01007408
371140
Betaproteobacteria
TTC
Glu
>WENV183730253
PJTR01007408
371140
Betaproteobacteria
TTC
Glu
>WENV183730301
PJTR01017632
178934
Betaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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