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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183736825
PJUD01000046
239991
Betaproteobacteria
TGG
Pro
>WENV183737328
PJUD01003741
212101
Betaproteobacteria
GAT
Ile
>WENV183737678
PJUD01021431
371259
Betaproteobacteria
TAC
Val
>WENV183738170
PJUD01101325
283937
Betaproteobacteria
GCC
Gly
>WENV183738236
PJUD01131497
305239
Betaproteobacteria
TTT
Lys
>WENV183737175
PJUD01001009
464758
Betaproteobacteria
GGT
Thr
>WENV183737249
PJUD01001806
464758
Betaproteobacteria
GGT
Thr
>WENV183737269
PJUD01002342
178141
Betaproteobacteria
CAT
Met
>WENV183737270
PJUD01002342
178141
Betaproteobacteria
CAT
Met
>WENV183738432
PJUD01204974
371140
Betaproteobacteria
TTC
Glu
>WENV183737281
PJUD01002696
300516
Betaproteobacteria
TTT
Lys
>WENV183738360
PJUD01176568
300516
Betaproteobacteria
TTT
Lys
>WENV183737251
PJUD01001896
300516
Betaproteobacteria
TTT
Lys
>WENV183737263
PJUD01002263
300516
Betaproteobacteria
TTT
Lys
>WENV183737275
PJUD01002504
300516
Betaproteobacteria
TTT
Lys
>WENV183736753
PJUD01000014
176193
Betaproteobacteria
TTG
Gln
>WENV183737442
PJUD01007697
180897
Betaproteobacteria
TCT
Arg
>WENV183737148
PJUD01000621
401202
Betaproteobacteria
CCT
Arg
>WENV183737895
PJUD01045584
284214
Betaproteobacteria
TAC
Val
>WENV183736829
PJUD01000046
117806
Betaproteobacteria
GTA
Tyr
>WENV183738064
PJUD01074665
283941
Betaproteobacteria
CTT
Lys
>WENV183738065
PJUD01074665
283941
Betaproteobacteria
CTT
Lys
>WENV183737302
PJUD01003210
467771
Betaproteobacteria
GGT
Thr
>WENV183737287
PJUD01002920
194596
Betaproteobacteria
TCT
Arg
>WENV183737776
PJUD01032171
366114
Betaproteobacteria
TTT
Lys
>WENV183737717
PJUD01024373
183734
Betaproteobacteria
TCT
Arg
>WENV183736798
PJUD01000032
177009
Betaproteobacteria
GGG
Pro
>WENV183737970
PJUD01058931
177009
Betaproteobacteria
GGG
Pro
>WENV183738409
PJUD01192188
178227
Betaproteobacteria
TCT
Arg
>WENV183738374
PJUD01180521
400348
Betaproteobacteria
CCT
Arg
>WENV183736830
PJUD01000046
283554
Betaproteobacteria
TCC
Gly
>WENV183738294
PJUD01152647
504022
Betaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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