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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183743584
PJUJ01007908
283937
Betaproteobacteria
GCC
Gly
>WENV183743430
PJUJ01001171
357205
Betaproteobacteria
GGC
Ala
>WENV183743433
PJUJ01001171
357205
Betaproteobacteria
GGC
Ala
>WENV183743634
PJUJ01012909
357205
Betaproteobacteria
GGC
Ala
>WENV183743624
PJUJ01011544
282862
Betaproteobacteria
TGC
Ala
>WENV183743265
PJUJ01000276
178934
Betaproteobacteria
CAT
Met
>WENV183743266
PJUJ01000276
178934
Betaproteobacteria
CAT
Met
>WENV183743421
PJUJ01001076
180897
Betaproteobacteria
TCT
Arg
>WENV183743721
PJUJ01030277
283941
Betaproteobacteria
CTT
Lys
>WENV183743613
PJUJ01010595
20508
Betaproteobacteria
GGA
Ser
>WENV183743307
PJUJ01000391
178217
Betaproteobacteria
TTG
Gln
>WENV183743645
PJUJ01014157
178217
Betaproteobacteria
TTG
Gln
>WENV183743585
PJUJ01008109
282942
Betaproteobacteria
CCG
Arg
>WENV183743654
PJUJ01014912
281681
Betaproteobacteria
TTT
Lys
>WENV183743311
PJUJ01000400
184549
Betaproteobacteria
CAT
Met
>WENV183743387
PJUJ01000803
184549
Betaproteobacteria
CAT
Met
>WENV183743660
PJUJ01015725
481266
Betaproteobacteria
GCA
Cys
>WENV183743513
PJUJ01003223
400288
Betaproteobacteria
CCT
Arg
>WENV183743530
PJUJ01003765
183734
Betaproteobacteria
TCT
Arg
>WENV183743631
PJUJ01012777
283938
Betaproteobacteria
CGT
Thr
>WENV183743506
PJUJ01003033
211214
Betaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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