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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170303600
CESH01378331
299323
Cyanobacteriota
CAT
Met
>WENV170301153
CESH01007909
208578
Cyanobacteriota
CGG
Pro
>WENV170301664
CESH01056682
326453
Cyanobacteriota
CGC
Ala
>WENV170301972
CESH01089491
73534
Cyanobacteriota
CAG
Leu
>WENV170301331
CESH01025464
30885
Cyanobacteriota
GGA
Ser
>WENV170301251
CESH01018164
283430
Cyanobacteriota
CCA
Trp
>WENV170301086
CESH01003606
400473
Cyanobacteriota
GAC
Val
>WENV170302395
CESH01144995
400473
Cyanobacteriota
GAC
Val
>WENV170303677
CESH01431926
414584
Cyanobacteriota
GAC
Val
>WENV170301345
CESH01026721
14711
Cyanobacteriota
GCT
Ser
>WENV170301417
CESH01034332
14711
Cyanobacteriota
GCT
Ser
>WENV170302428
CESH01150077
292138
Cyanobacteriota
CCA
Trp
>WENV170303766
CESH01486256
410287
Cyanobacteriota
CCC
Gly
>WENV170301225
CESH01014744
177076
Cyanobacteriota
GTC
Asp
>WENV170301645
CESH01055013
404675
Cyanobacteriota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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