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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170385234
CETY01051657
180925
Cyanobacteriota
ACG
Arg
>WENV170386269
CETY01151931
73307
Cyanobacteriota
CAG
Leu
>WENV170384658
CETY01004503
285848
Cyanobacteriota
CAT
Met
>WENV170387252
CETY01372946
185831
Cyanobacteriota
CAT
Met
>WENV170385023
CETY01032625
292138
Cyanobacteriota
CCA
Trp
>WENV170385488
CETY01072193
410287
Cyanobacteriota
CCC
Gly
>WENV170384849
CETY01019031
178673
Cyanobacteriota
CCG
Arg
>WENV170385938
CETY01117366
178673
Cyanobacteriota
CCG
Arg
>WENV170385201
CETY01047330
326453
Cyanobacteriota
CGC
Ala
>WENV170386740
CETY01193879
208578
Cyanobacteriota
CGG
Pro
>WENV170385088
CETY01038322
400473
Cyanobacteriota
GAC
Val
>WENV170385065
CETY01036061
30885
Cyanobacteriota
GGA
Ser
>WENV170384998
CETY01030230
282452
Cyanobacteriota
GGC
Ala
>WENV170385777
CETY01100321
195553
Cyanobacteriota
GGG
Pro
>WENV170385424
CETY01067317
228486
Cyanobacteriota
GTC
Asp
>WENV170385766
CETY01099392
291400
Cyanobacteriota
GTG
His
>WENV170385026
CETY01032890
400477
Cyanobacteriota
GTT
Asn
>WENV170386282
CETY01153169
400477
Cyanobacteriota
GTT
Asn
>WENV170384808
CETY01016051
46946
Cyanobacteriota
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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