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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170406995
CEUH01081698
208578
Cyanobacteriota
CGG
Pro
>WENV170407791
CEUH01221299
73534
Cyanobacteriota
CAG
Leu
>WENV170406921
CEUH01072549
30885
Cyanobacteriota
GGA
Ser
>WENV170406981
CEUH01080261
118720
Cyanobacteriota
CAA
Leu
>WENV170406946
CEUH01075960
14711
Cyanobacteriota
GCT
Ser
>WENV170407368
CEUH01130397
30082
Cyanobacteriota
TGA
Ser
>WENV170406829
CEUH01062021
343795
Cyanobacteriota
GGC
Ala
>WENV170407401
CEUH01133956
283431
Cyanobacteriota
GTG
His
>WENV170406234
CEUH01010178
178673
Cyanobacteriota
CCG
Arg
>WENV170406953
CEUH01076544
219114
Cyanobacteriota
GGG
Pro
>WENV170407256
CEUH01119710
219114
Cyanobacteriota
GGG
Pro
>WENV170407006
CEUH01083937
177076
Cyanobacteriota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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