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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170484399
CEVN01019433
208578
Cyanobacteriota
CGG
Pro
>WENV170486061
CEVN01156580
57522
Cyanobacteriota
CGA
Ser
>WENV170485926
CEVN01150215
30885
Cyanobacteriota
GGA
Ser
>WENV170484670
CEVN01037447
100172
Cyanobacteriota
CAA
Leu
>WENV170485563
CEVN01117710
100172
Cyanobacteriota
CAA
Leu
>WENV170485160
CEVN01080416
400475
Cyanobacteriota
TGT
Thr
>WENV170485463
CEVN01107757
29722
Cyanobacteriota
CGA
Ser
>WENV170484752
CEVN01043625
228486
Cyanobacteriota
GTC
Asp
>WENV170484253
CEVN01008596
343795
Cyanobacteriota
GGC
Ala
>WENV170485639
CEVN01125347
343795
Cyanobacteriota
GGC
Ala
>WENV170484403
CEVN01019789
283431
Cyanobacteriota
GTG
His
>WENV170485181
CEVN01081861
400477
Cyanobacteriota
GTT
Asn
>WENV170486214
CEVN01159870
178673
Cyanobacteriota
CCG
Arg
>WENV170486243
CEVN01159977
185831
Cyanobacteriota
CAT
Met
>WENV170485379
CEVN01101648
177220
Cyanobacteriota
CAT
Met
>WENV170486162
CEVN01159172
400471
Cyanobacteriota
TAC
Val
>WENV170485191
CEVN01083668
177076
Cyanobacteriota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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