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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170515166
CEWB01007421
73534
Cyanobacteriota
CAG
Leu
>WENV170515499
CEWB01029425
73534
Cyanobacteriota
CAG
Leu
>WENV170515334
CEWB01017636
185579
Cyanobacteriota
CAT
Met
>WENV170515939
CEWB01066131
178673
Cyanobacteriota
CCG
Arg
>WENV170516160
CEWB01087722
178673
Cyanobacteriota
CCG
Arg
>WENV170515042
CEWB01000540
326453
Cyanobacteriota
CGC
Ala
>WENV170515335
CEWB01017719
326453
Cyanobacteriota
CGC
Ala
>WENV170515842
CEWB01057408
326453
Cyanobacteriota
CGC
Ala
>WENV170515082
CEWB01002248
208578
Cyanobacteriota
CGG
Pro
>WENV170515684
CEWB01044769
400473
Cyanobacteriota
GAC
Val
>WENV170515767
CEWB01051307
400473
Cyanobacteriota
GAC
Val
>WENV170515150
CEWB01006618
14711
Cyanobacteriota
GCT
Ser
>WENV170515967
CEWB01069320
14711
Cyanobacteriota
GCT
Ser
>WENV170515317
CEWB01016459
282452
Cyanobacteriota
GGC
Ala
>WENV170515479
CEWB01028064
177076
Cyanobacteriota
GTC
Asp
>WENV170515353
CEWB01018713
283431
Cyanobacteriota
GTG
His
>WENV170515078
CEWB01002138
283431
Cyanobacteriota
GTG
His
>WENV170515218
CEWB01010043
400477
Cyanobacteriota
GTT
Asn
>WENV170516019
CEWB01074502
400475
Cyanobacteriota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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