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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183721846
PDWJ01090783
141145
Fusobacteriota
>WENV183720186
PDWJ01028691
280538
Fusobacteriota
TTT
Lys
>WENV183721056
PDWJ01053621
184485
Fusobacteriota
GTC
Asp
>WENV183721329
PDWJ01064758
183767
Fusobacteriota
TGC
Ala
>WENV183722581
PDWJ01140417
183767
Fusobacteriota
TGC
Ala
>WENV183720188
PDWJ01028691
464812
Fusobacteriota
TTG
Gln
>WENV183720441
PDWJ01034420
292724
Fusobacteriota
TTT
Lys
>WENV183720629
PDWJ01040070
288878
Fusobacteriota
TGT
Thr
>WENV183720185
PDWJ01028681
289708
Fusobacteriota
TGT
Thr
>WENV183721055
PDWJ01053621
289709
Fusobacteriota
TAC
Val
>WENV183720187
PDWJ01028691
141384
Fusobacteriota
TAG
Leu
>WENV183720712
PDWJ01042603
295075
Fusobacteriota
TAC
Val
>WENV183722116
PDWJ01106644
295075
Fusobacteriota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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