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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183615987
OOEC01016674
238941
Gammaproteobacteria
>WENV183615875
OOEC01000134
148442
Gammaproteobacteria
ACG
Arg
>WENV183616004
OOEC01019800
59485
Gammaproteobacteria
CAG
Leu
>WENV183616061
OOEC01042463
145713
Gammaproteobacteria
CAT
Met
>WENV183615881
OOEC01000449
149036
Gammaproteobacteria
CCA
Trp
>WENV183615989
OOEC01017671
247088
Gammaproteobacteria
CCA
Trp
>WENV183615897
OOEC01001746
147645
Gammaproteobacteria
GAC
Val
>WENV183615859
OOEC01000010
412799
Gammaproteobacteria
GCA
Cys
>WENV183616045
OOEC01037326
45345
Gammaproteobacteria
GGA
Ser
>WENV183616029
OOEC01027451
95866
Gammaproteobacteria
GTA
Tyr
>WENV183615899
OOEC01001801
147053
Gammaproteobacteria
GTT
Asn
>WENV183615900
OOEC01001801
147053
Gammaproteobacteria
GTT
Asn
>WENV183615860
OOEC01000010
59979
Gammaproteobacteria
TAA
Leu
>WENV183615862
OOEC01000039
237766
Gammaproteobacteria
TAC
Val
>WENV183615863
OOEC01000039
237766
Gammaproteobacteria
TAC
Val
>WENV183616239
OOEC01199032
237766
Gammaproteobacteria
TAC
Val
>WENV183615997
OOEC01018665
237412
Gammaproteobacteria
TAC
Val
>WENV183615890
OOEC01001010
10850
Gammaproteobacteria
TGA
Ser
>WENV183616055
OOEC01040984
150648
Gammaproteobacteria
TGG
Pro
>WENV183616190
OOEC01144842
243485
Gammaproteobacteria
TGT
Thr
>WENV183616082
OOEC01053328
245602
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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