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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183619055
OOFP01020849
149578
Gammaproteobacteria
ACG
Arg
>WENV183619113
OOFP01028407
149578
Gammaproteobacteria
ACG
Arg
>WENV183618806
OOFP01000040
145713
Gammaproteobacteria
CAT
Met
>WENV183618982
OOFP01011063
149661
Gammaproteobacteria
CAT
Met
>WENV183618852
OOFP01000924
247088
Gammaproteobacteria
CCA
Trp
>WENV183619084
OOFP01024511
250885
Gammaproteobacteria
TGC
Ala
>WENV183618904
OOFP01003301
157977
Gammaproteobacteria
TGG
Pro
>WENV183618833
OOFP01000424
243485
Gammaproteobacteria
TGT
Thr
>WENV183618875
OOFP01002338
243485
Gammaproteobacteria
TGT
Thr
>WENV183619157
OOFP01035577
237421
Gammaproteobacteria
TGT
Thr
>WENV183618924
OOFP01004313
238433
Gammaproteobacteria
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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