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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183637159
OPGP01000038
95575
Gammaproteobacteria
>WENV183637135
OPGP01000026
75381
Gammaproteobacteria
CAG
Leu
>WENV183637293
OPGP01012301
73589
Gammaproteobacteria
CAG
Leu
>WENV183637155
OPGP01000034
73589
Gammaproteobacteria
CAG
Leu
>WENV183637137
OPGP01000026
73589
Gammaproteobacteria
CAG
Leu
>WENV183637136
OPGP01000026
73589
Gammaproteobacteria
CAG
Leu
>WENV183637226
OPGP01000438
58859
Gammaproteobacteria
CAG
Leu
>WENV183637233
OPGP01000544
145562
Gammaproteobacteria
CAT
Met
>WENV183637284
OPGP01009777
411785
Gammaproteobacteria
CCC
Gly
>WENV183637204
OPGP01000322
190805
Gammaproteobacteria
CCG
Arg
>WENV183637305
OPGP01035749
190805
Gammaproteobacteria
CCG
Arg
>WENV183637147
OPGP01000029
31879
Gammaproteobacteria
GGA
Ser
>WENV183637146
OPGP01000029
31879
Gammaproteobacteria
GGA
Ser
>WENV183637162
OPGP01000046
144739
Gammaproteobacteria
GGG
Pro
>WENV183637246
OPGP01001335
145335
Gammaproteobacteria
GGG
Pro
>WENV183637192
OPGP01000128
235837
Gammaproteobacteria
GTT
Asn
>WENV183637290
OPGP01010840
243902
Gammaproteobacteria
GTT
Asn
>WENV183637286
OPGP01010840
243902
Gammaproteobacteria
GTT
Asn
>WENV183637303
OPGP01028673
77228
Gammaproteobacteria
TAA
Leu
>WENV183637270
OPGP01005001
77228
Gammaproteobacteria
TAA
Leu
>WENV183637181
OPGP01000098
315638
Gammaproteobacteria
TAC
Val
>WENV183637180
OPGP01000098
315638
Gammaproteobacteria
TAC
Val
>WENV183637131
OPGP01000021
315638
Gammaproteobacteria
TAC
Val
>WENV183637240
OPGP01000896
319098
Gammaproteobacteria
TAC
Val
>WENV183637124
OPGP01000020
95576
Gammaproteobacteria
TAG
Leu
>WENV183637259
OPGP01002864
95729
Gammaproteobacteria
TAG
Leu
>WENV183637294
OPGP01012388
144732
Gammaproteobacteria
TCT
Arg
>WENV183637129
OPGP01000020
144732
Gammaproteobacteria
TCT
Arg
>WENV183637239
OPGP01000864
16301
Gammaproteobacteria
TGA
Ser
>WENV183637148
OPGP01000033
52367
Gammaproteobacteria
TGA
Ser
>WENV183637132
OPGP01000021
307413
Gammaproteobacteria
TTT
Lys
>WENV183637133
OPGP01000021
307413
Gammaproteobacteria
TTT
Lys
>WENV183637134
OPGP01000021
307413
Gammaproteobacteria
TTT
Lys
>WENV183637289
OPGP01010840
243899
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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