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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183729975
PJTR01000276
165964
Gammaproteobacteria
ACG
Arg
>WENV183730363
PJTR01032576
65387
Gammaproteobacteria
CAG
Leu
>WENV183729944
PJTR01000225
145334
Gammaproteobacteria
CCG
Arg
>WENV183729977
PJTR01000276
147595
Gammaproteobacteria
CCT
Arg
>WENV183729831
PJTR01000103
238307
Gammaproteobacteria
GAA
Phe
>WENV183729973
PJTR01000276
16446
Gammaproteobacteria
GCT
Ser
>WENV183729830
PJTR01000101
23711
Gammaproteobacteria
GGA
Ser
>WENV183729802
PJTR01000086
96066
Gammaproteobacteria
TAA
Leu
>WENV183730040
PJTR01000389
96065
Gammaproteobacteria
TAG
Leu
>WENV183729800
PJTR01000086
51143
Gammaproteobacteria
TGA
Ser
>WENV183729832
PJTR01000103
279806
Gammaproteobacteria
TGT
Thr
>WENV183729792
PJTR01000080
410215
Gammaproteobacteria
TTG
Gln
>WENV183729704
PJTR01000023
410215
Gammaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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