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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183738741
PJUE01000140
20224
Gammaproteobacteria
CGA
Ser
>WENV183739079
PJUE01001440
20224
Gammaproteobacteria
CGA
Ser
>WENV183738920
PJUE01000443
330651
Gammaproteobacteria
TGT
Thr
>WENV183739374
PJUE01011520
330651
Gammaproteobacteria
TGT
Thr
>WENV183739081
PJUE01001457
185120
Gammaproteobacteria
GGG
Pro
>WENV183739097
PJUE01001615
185120
Gammaproteobacteria
GGG
Pro
>WENV183739642
PJUE01046305
366546
Gammaproteobacteria
GTG
His
>WENV183738864
PJUE01000325
481357
Gammaproteobacteria
GCA
Cys
>WENV183738778
PJUE01000188
481287
Gammaproteobacteria
GCA
Cys
>WENV183738806
PJUE01000221
176627
Gammaproteobacteria
CCG
Arg
>WENV183739150
PJUE01002374
60942
Gammaproteobacteria
GGA
Ser
>WENV183739334
PJUE01008515
60942
Gammaproteobacteria
GGA
Ser
>WENV183739406
PJUE01014336
60942
Gammaproteobacteria
GGA
Ser
>WENV183739499
PJUE01024484
481358
Gammaproteobacteria
CTG
Gln
>WENV183738758
PJUE01000168
63595
Gammaproteobacteria
TGA
Ser
>WENV183739279
PJUE01005848
10977
Gammaproteobacteria
GCT
Ser
>WENV183738781
PJUE01000188
179475
Gammaproteobacteria
ACG
Arg
>WENV183738782
PJUE01000188
179475
Gammaproteobacteria
ACG
Arg
>WENV183738683
PJUE01000095
118322
Gammaproteobacteria
TAA
Leu
>WENV183739419
PJUE01014894
118322
Gammaproteobacteria
TAA
Leu
>WENV183738874
PJUE01000331
400853
Gammaproteobacteria
CTG
Gln
>WENV183738875
PJUE01000331
400853
Gammaproteobacteria
CTG
Gln
>WENV183738722
PJUE01000130
225941
Gammaproteobacteria
GGG
Pro
>WENV183738788
PJUE01000195
205770
Gammaproteobacteria
ACG
Arg
>WENV183738789
PJUE01000195
205770
Gammaproteobacteria
ACG
Arg
>WENV183738790
PJUE01000195
205770
Gammaproteobacteria
ACG
Arg
>WENV183738791
PJUE01000195
205770
Gammaproteobacteria
ACG
Arg
>WENV183739623
PJUE01043795
205770
Gammaproteobacteria
ACG
Arg
>WENV183739671
PJUE01054114
205770
Gammaproteobacteria
ACG
Arg
>WENV183739673
PJUE01054115
205770
Gammaproteobacteria
ACG
Arg
>WENV183739250
PJUE01004725
20472
Gammaproteobacteria
GCT
Ser
>WENV183739670
PJUE01054114
20472
Gammaproteobacteria
GCT
Ser
>WENV183739672
PJUE01054115
20472
Gammaproteobacteria
GCT
Ser
>WENV183738779
PJUE01000188
12365
Gammaproteobacteria
GCT
Ser
>WENV183738549
PJUE01000017
480368
Gammaproteobacteria
CCC
Gly
>WENV183738975
PJUE01000703
480368
Gammaproteobacteria
CCC
Gly
>WENV183738882
PJUE01000349
29777
Gammaproteobacteria
GGA
Ser
>WENV183738897
PJUE01000377
38349
Gammaproteobacteria
TGA
Ser
>WENV183738737
PJUE01000140
398939
Gammaproteobacteria
TAC
Val
>WENV183738957
PJUE01000605
117930
Gammaproteobacteria
CAA
Leu
>WENV183739427
PJUE01015622
117930
Gammaproteobacteria
CAA
Leu
>WENV183738792
PJUE01000195
179074
Gammaproteobacteria
CCT
Arg
>WENV183739383
PJUE01012119
179074
Gammaproteobacteria
CCT
Arg
>WENV183738627
PJUE01000049
284316
Gammaproteobacteria
TGT
Thr
>WENV183738984
PJUE01000735
284316
Gammaproteobacteria
TGT
Thr
>WENV183739582
PJUE01035323
74718
Gammaproteobacteria
GAG
Leu
>WENV183738606
PJUE01000039
118321
Gammaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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