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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183744031
PJUK01000180
362875
Gammaproteobacteria
GAA
Phe
>WENV183744032
PJUK01000180
362875
Gammaproteobacteria
GAA
Phe
>WENV183743789
PJUK01000002
23966
Gammaproteobacteria
CGA
Ser
>WENV183743877
PJUK01000019
29419
Gammaproteobacteria
GGA
Ser
>WENV183743913
PJUK01000039
480367
Gammaproteobacteria
GCA
Cys
>WENV183743946
PJUK01000054
399050
Gammaproteobacteria
CCT
Arg
>WENV183743780
PJUK01000001
400267
Gammaproteobacteria
CTG
Gln
>WENV183743922
PJUK01000044
280882
Gammaproteobacteria
GTG
His
>WENV183743819
PJUK01000005
176627
Gammaproteobacteria
CCG
Arg
>WENV183743907
PJUK01000034
192143
Gammaproteobacteria
GGG
Pro
>WENV183743972
PJUK01000080
184266
Gammaproteobacteria
GAC
Val
>WENV183743926
PJUK01000046
56108
Gammaproteobacteria
TGA
Ser
>WENV183743781
PJUK01000001
480983
Gammaproteobacteria
CCC
Gly
>WENV183743801
PJUK01000002
218310
Gammaproteobacteria
GTG
His
>WENV183744207
PJUK01001869
280876
Gammaproteobacteria
GGT
Thr
>WENV183744005
PJUK01000122
176244
Gammaproteobacteria
TGG
Pro
>WENV183743935
PJUK01000049
176241
Gammaproteobacteria
CGG
Pro
>WENV183743929
PJUK01000046
73063
Gammaproteobacteria
TAA
Leu
>WENV183744205
PJUK01001869
117821
Gammaproteobacteria
GTA
Tyr
>WENV183744378
PJUK01014137
443938
Gammaproteobacteria
GAC
Val
>WENV183743968
PJUK01000080
117788
Gammaproteobacteria
TAG
Leu
>WENV183743970
PJUK01000080
117788
Gammaproteobacteria
TAG
Leu
>WENV183743911
PJUK01000039
315947
Gammaproteobacteria
CGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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