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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183745380
POVV01000001
195476
Gammaproteobacteria
GAC
Val
>WENV183745399
POVV01000003
195476
Gammaproteobacteria
GAC
Val
>WENV183745417
POVV01000005
201994
Gammaproteobacteria
TCT
Arg
>WENV183745468
POVV01000026
201994
Gammaproteobacteria
TCT
Arg
>WENV183745473
POVV01000030
83909
Gammaproteobacteria
CAG
Leu
>WENV183745501
POVV01000035
83817
Gammaproteobacteria
TAA
Leu
>WENV183745509
POVV01000040
481246
Gammaproteobacteria
GCA
Cys
>WENV183745510
POVV01000040
83817
Gammaproteobacteria
TAA
Leu
>WENV183745529
POVV01000065
83909
Gammaproteobacteria
CAG
Leu
>WENV183745546
POVV01000074
210159
Gammaproteobacteria
CAT
Met
>WENV183745542
POVV01000074
178472
Gammaproteobacteria
CAT
Met
>WENV183745560
POVV01000087
83909
Gammaproteobacteria
CAG
Leu
>WENV183745567
POVV01000092
100274
Gammaproteobacteria
CAG
Leu
>WENV183745566
POVV01000092
282946
Gammaproteobacteria
GTG
His
>WENV183745585
POVV01000110
122262
Gammaproteobacteria
GTA
Tyr
>WENV183745625
POVV01000174
210159
Gammaproteobacteria
CAT
Met
>WENV183745629
POVV01000174
210159
Gammaproteobacteria
CAT
Met
>WENV183745636
POVV01000185
83194
Gammaproteobacteria
GAG
Leu
>WENV183745646
POVV01000208
208382
Gammaproteobacteria
ACG
Arg
>WENV183745647
POVV01000208
208382
Gammaproteobacteria
ACG
Arg
>WENV183745648
POVV01000208
208382
Gammaproteobacteria
ACG
Arg
>WENV183745673
POVV01000284
56566
Gammaproteobacteria
GGA
Ser
>WENV183745875
POVV01001518
401830
Gammaproteobacteria
TTG
Gln
>WENV183745876
POVV01001518
401830
Gammaproteobacteria
TTG
Gln
>WENV183745879
POVV01001518
401830
Gammaproteobacteria
TTG
Gln
>WENV183746321
POVV01028283
176241
Gammaproteobacteria
CGG
Pro
>WENV183746382
POVV01036075
73063
Gammaproteobacteria
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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