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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183710194
PDWI01041460
284198
Spirochaetota
CAT
Met
>WENV183710353
PDWI01044849
284198
Spirochaetota
CAT
Met
>WENV183705233
PDWI01001250
178845
Spirochaetota
CAT
Met
>WENV183709779
PDWI01033865
178845
Spirochaetota
CAT
Met
>WENV183710423
PDWI01046388
178845
Spirochaetota
CAT
Met
>WENV183713383
PDWI01136215
178845
Spirochaetota
CAT
Met
>WENV183714248
PDWI01175134
178845
Spirochaetota
CAT
Met
>WENV183714438
PDWI01183972
282760
Spirochaetota
CCA
Trp
>WENV183707986
PDWI01012037
282765
Spirochaetota
GAA
Phe
>WENV183711103
PDWI01061172
282765
Spirochaetota
GAA
Phe
>WENV183711218
PDWI01063519
282765
Spirochaetota
GAA
Phe
>WENV183713179
PDWI01128126
282765
Spirochaetota
GAA
Phe
>WENV183714508
PDWI01188134
282765
Spirochaetota
GAA
Phe
>WENV183715833
PDWI01266164
282765
Spirochaetota
GAA
Phe
>WENV183709788
PDWI01034160
178073
Spirochaetota
GGC
Ala
>WENV183710854
PDWI01054658
183891
Spirochaetota
GGG
Pro
>WENV183711198
PDWI01063082
183891
Spirochaetota
GGG
Pro
>WENV183714664
PDWI01196933
183891
Spirochaetota
GGG
Pro
>WENV183704403
PDWI01000202
399341
Spirochaetota
TCC
Gly
>WENV183706655
PDWI01005018
399341
Spirochaetota
TCC
Gly
>WENV183709421
PDWI01028079
399341
Spirochaetota
TCC
Gly
>WENV183713439
PDWI01138741
399341
Spirochaetota
TCC
Gly
>WENV183714234
PDWI01174384
399341
Spirochaetota
TCC
Gly
>WENV183714829
PDWI01205773
399341
Spirochaetota
TCC
Gly
>WENV183715136
PDWI01223382
399341
Spirochaetota
TCC
Gly
>WENV183715159
PDWI01224610
399341
Spirochaetota
TCC
Gly
>WENV183715300
PDWI01231751
399341
Spirochaetota
TCC
Gly
>WENV183715400
PDWI01239098
399341
Spirochaetota
TCC
Gly
>WENV183704851
PDWI01000685
403723
Spirochaetota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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