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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183540304
OOAJ01009088
144620
Thermodesulfobacteriota
GGG
Pro
>WENV183540049
OOAJ01001926
156932
Thermodesulfobacteriota
ACG
Arg
>WENV183540164
OOAJ01003582
156932
Thermodesulfobacteriota
ACG
Arg
>WENV183540213
OOAJ01004904
156932
Thermodesulfobacteriota
ACG
Arg
>WENV183540323
OOAJ01010759
156932
Thermodesulfobacteriota
ACG
Arg
>WENV183540205
OOAJ01004738
345926
Thermodesulfobacteriota
CTG
Gln
>WENV183540092
OOAJ01002509
248694
Thermodesulfobacteriota
CAT
Met
>WENV183540186
OOAJ01004113
3467
Thermodesulfobacteriota
CGA
Ser
>WENV183540251
OOAJ01006563
293933
Thermodesulfobacteriota
TTT
Lys
>WENV183540266
OOAJ01007125
266268
Thermodesulfobacteriota
TCC
Gly
>WENV183540163
OOAJ01003582
128663
Thermodesulfobacteriota
CGG
Pro
>WENV183540229
OOAJ01005396
179273
Thermodesulfobacteriota
GTC
Asp
>WENV183540228
OOAJ01005396
179273
Thermodesulfobacteriota
GTC
Asp
>WENV183540206
OOAJ01004738
156452
Thermodesulfobacteriota
TTC
Glu
>WENV183540437
OOAJ01029495
248567
Thermodesulfobacteriota
CTT
Lys
>WENV183540221
OOAJ01005236
3406
Thermodesulfobacteriota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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