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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183579235
OOCM01000370
151846
Thermodesulfobacteriota
CCA
Trp
>WENV183579379
OOCM01000741
156932
Thermodesulfobacteriota
ACG
Arg
>WENV183579378
OOCM01000741
128663
Thermodesulfobacteriota
CGG
Pro
>WENV183579380
OOCM01000742
156932
Thermodesulfobacteriota
ACG
Arg
>WENV183579486
OOCM01001135
3467
Thermodesulfobacteriota
CGA
Ser
>WENV183579511
OOCM01001221
3406
Thermodesulfobacteriota
GCT
Ser
>WENV183579517
OOCM01001260
248694
Thermodesulfobacteriota
CAT
Met
>WENV183579632
OOCM01002005
156452
Thermodesulfobacteriota
TTC
Glu
>WENV183579678
OOCM01002544
248567
Thermodesulfobacteriota
CTT
Lys
>WENV183579775
OOCM01003756
156452
Thermodesulfobacteriota
TTC
Glu
>WENV183579784
OOCM01003975
345926
Thermodesulfobacteriota
CTG
Gln
>WENV183579813
OOCM01004420
144620
Thermodesulfobacteriota
GGG
Pro
>WENV183579814
OOCM01004420
144620
Thermodesulfobacteriota
GGG
Pro
>WENV183579863
OOCM01005423
293933
Thermodesulfobacteriota
TTT
Lys
>WENV183579862
OOCM01005423
3406
Thermodesulfobacteriota
GCT
Ser
>WENV183580118
OOCM01019504
179273
Thermodesulfobacteriota
GTC
Asp
>WENV183580117
OOCM01019504
179273
Thermodesulfobacteriota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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