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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183579233
OOCM01000370
101766
Thermodesulfobacteriota
GTA
Tyr
>WENV183579235
OOCM01000370
183758
Thermodesulfobacteriota
CCA
Trp
>WENV183579270
OOCM01000460
407608
Thermodesulfobacteriota
TTG
Gln
>WENV183579385
OOCM01000767
302242
Thermodesulfobacteriota
GAA
Phe
>WENV183579632
OOCM01002005
188874
Thermodesulfobacteriota
TTC
Glu
>WENV183579678
OOCM01002544
295177
Thermodesulfobacteriota
CTT
Lys
>WENV183579702
OOCM01002871
294203
Thermodesulfobacteriota
GGC
Ala
>WENV183579763
OOCM01003632
356383
Thermodesulfobacteriota
TGT
Thr
>WENV183579775
OOCM01003756
188874
Thermodesulfobacteriota
TTC
Glu
>WENV183579813
OOCM01004420
175867
Thermodesulfobacteriota
GGG
Pro
>WENV183579814
OOCM01004420
175867
Thermodesulfobacteriota
GGG
Pro
>WENV183579863
OOCM01005423
295271
Thermodesulfobacteriota
TTT
Lys
>WENV183580117
OOCM01019504
214925
Thermodesulfobacteriota
GTC
Asp
>WENV183580118
OOCM01019504
214925
Thermodesulfobacteriota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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