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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV077967
AAFY01000335
656001
Alphaproteobacteria
GCC
Gly
>WENV077968
AAFY01000335
656001
Alphaproteobacteria
GCC
Gly
>WENV078056
AAFY01014084
479047
Alphaproteobacteria
TTT
Lys
>WENV077993
AAFY01003329
117253
Alphaproteobacteria
GAG
Leu
>WENV078137
AAFY01026331
112802
Alphaproteobacteria
GAG
Leu
>WENV078309
AAFZ01024480
655167
Alphaproteobacteria
TTC
Glu
>WENV078201
AAFZ01007080
653534
Alphaproteobacteria
GCC
Gly
>WENV078246
AAFZ01014119
218119
Alphaproteobacteria
>WENV078287
AAFZ01021297
479115
Alphaproteobacteria
GTT
Asn
>WENV078323
AAFZ01026463
456410
Alphaproteobacteria
CGT
Thr
>WENV078166
AAFZ01001914
655359
Alphaproteobacteria
GAC
Val
>WENV078319
AAFZ01026301
655358
Alphaproteobacteria
TTG
Gln
>WENV078185
AAFZ01004441
275730
Alphaproteobacteria
TGG
Pro
>WENV078314
AAFZ01024952
780327
Alphaproteobacteria
GCA
Cys
>WENV078183
AAFZ01004309
655166
Alphaproteobacteria
CAC
Val
>WENV078232
AAFZ01011521
455363
Alphaproteobacteria
GGC
Ala
>WENV078290
AAFZ01021812
455363
Alphaproteobacteria
GGC
Ala
>WENV078293
AAFZ01021961
455360
Alphaproteobacteria
CGC
Ala
>WENV078292
AAFZ01021927
660380
Alphaproteobacteria
GGT
Thr
>WENV078215
AAFZ01009233
281027
Alphaproteobacteria
CCT
Arg
>WENV078213
AAFZ01008290
302261
Alphaproteobacteria
GAT
Ile
>WENV078278
AAFZ01020294
653539
Alphaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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