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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
68 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV11101986
AGFT01038603
456952
Gammaproteobacteria
CGC
Ala
>WENV170001914
AGFT01038603
456952
Gammaproteobacteria
CGC
Ala
>WENV11102111
AGFT01081832
271453
Gammaproteobacteria
GGG
Pro
>WENV11102121
AGFT01085201
271453
Gammaproteobacteria
GGG
Pro
>WENV170002039
AGFT01081832
271453
Gammaproteobacteria
GGG
Pro
>WENV170002049
AGFT01085201
271453
Gammaproteobacteria
GGG
Pro
>WENV11102164
AGFT01110679
180097
Gammaproteobacteria
GTA
Tyr
>WENV170002092
AGFT01110679
180097
Gammaproteobacteria
GTA
Tyr
>WENV11101909
AGFT01004401
455856
Gammaproteobacteria
TGT
Thr
>WENV170001837
AGFT01004401
455856
Gammaproteobacteria
TGT
Thr
>WENV11102204
AGFT01123571
779416
Gammaproteobacteria
CCC
Gly
>WENV170002132
AGFT01123571
779416
Gammaproteobacteria
CCC
Gly
>WENV11101943
AGFT01017739
271107
Gammaproteobacteria
CAT
Met
>WENV11102181
AGFT01115982
271107
Gammaproteobacteria
CAT
Met
>WENV11102217
AGFT01128284
271107
Gammaproteobacteria
CAT
Met
>WENV170001871
AGFT01017739
271107
Gammaproteobacteria
CAT
Met
>WENV170002109
AGFT01115982
271107
Gammaproteobacteria
CAT
Met
>WENV170002145
AGFT01128284
271107
Gammaproteobacteria
CAT
Met
>WENV11102125
AGFT01087873
455855
Gammaproteobacteria
GAA
Phe
>WENV170002053
AGFT01087873
455855
Gammaproteobacteria
GAA
Phe
>WENV11101954
AGFT01022618
180135
Gammaproteobacteria
CAA
Leu
>WENV170001882
AGFT01022618
180135
Gammaproteobacteria
CAA
Leu
>WENV11101944
AGFT01017760
47106
Gammaproteobacteria
CGA
Ser
>WENV170001872
AGFT01017760
47106
Gammaproteobacteria
CGA
Ser
>WENV11102109
AGFT01080948
452463
Gammaproteobacteria
TGT
Thr
>WENV170002037
AGFT01080948
452463
Gammaproteobacteria
TGT
Thr
>WENV11102066
AGFT01064463
47108
Gammaproteobacteria
TGA
Ser
>WENV170001994
AGFT01064463
47108
Gammaproteobacteria
TGA
Ser
>WENV11102146
AGFT01103984
458856
Gammaproteobacteria
GAA
Phe
>WENV170002074
AGFT01103984
458856
Gammaproteobacteria
GAA
Phe
>WENV11102034
AGFT01052851
779437
Gammaproteobacteria
CCC
Gly
>WENV170001962
AGFT01052851
779437
Gammaproteobacteria
CCC
Gly
>WENV11102129
AGFT01089981
452400
Gammaproteobacteria
CCA
Trp
>WENV170002057
AGFT01089981
452400
Gammaproteobacteria
CCA
Trp
>WENV11102182
AGFT01116088
112276
Gammaproteobacteria
CAG
Leu
>WENV170002110
AGFT01116088
112276
Gammaproteobacteria
CAG
Leu
>WENV11101927
AGFT01011125
281156
Gammaproteobacteria
CCT
Arg
>WENV170001855
AGFT01011125
281156
Gammaproteobacteria
CCT
Arg
>WENV11102028
AGFT01049936
780704
Gammaproteobacteria
GCA
Cys
>WENV170001956
AGFT01049936
780704
Gammaproteobacteria
GCA
Cys
>WENV11102054
AGFT01058818
779616
Gammaproteobacteria
GCA
Cys
>WENV170001982
AGFT01058818
779616
Gammaproteobacteria
GCA
Cys
>WENV11102191
AGFT01119967
180637
Gammaproteobacteria
TAG
Leu
>WENV170002119
AGFT01119967
180637
Gammaproteobacteria
TAG
Leu
>WENV11102011
AGFT01045727
281160
Gammaproteobacteria
TCT
Arg
>WENV11102130
AGFT01091498
281160
Gammaproteobacteria
TCT
Arg
>WENV170001939
AGFT01045727
281160
Gammaproteobacteria
TCT
Arg
>WENV170002058
AGFT01091498
281160
Gammaproteobacteria
TCT
Arg
>WENV11102006
AGFT01044904
277433
Gammaproteobacteria
CAT
Met
>WENV11102128
AGFT01089713
277433
Gammaproteobacteria
CAT
Met
>WENV170001934
AGFT01044904
277433
Gammaproteobacteria
CAT
Met
>WENV170002056
AGFT01089713
277433
Gammaproteobacteria
CAT
Met
>WENV11102022
AGFT01048301
779672
Gammaproteobacteria
GCA
Cys
>WENV170001950
AGFT01048301
779672
Gammaproteobacteria
GCA
Cys
>WENV11102023
AGFT01048301
112425
Gammaproteobacteria
TAA
Leu
>WENV170001951
AGFT01048301
112425
Gammaproteobacteria
TAA
Leu
>WENV11101918
AGFT01008344
87336
Gammaproteobacteria
TGA
Ser
>WENV170001846
AGFT01008344
87336
Gammaproteobacteria
TGA
Ser
>WENV11102213
AGFT01126523
271700
Gammaproteobacteria
CAT
Met
>WENV170002141
AGFT01126523
271700
Gammaproteobacteria
CAT
Met
>WENV11102120
AGFT01084686
153700
Gammaproteobacteria
CAG
Leu
>WENV170002048
AGFT01084686
153700
Gammaproteobacteria
CAG
Leu
>WENV11102190
AGFT01119619
281170
Gammaproteobacteria
TCT
Arg
>WENV170002118
AGFT01119619
281170
Gammaproteobacteria
TCT
Arg
>WENV11101934
AGFT01014250
452504
Gammaproteobacteria
TGT
Thr
>WENV170001862
AGFT01014250
452504
Gammaproteobacteria
TGT
Thr
>WENV11102132
AGFT01094175
453929
Gammaproteobacteria
GAA
Phe
>WENV170002060
AGFT01094175
453929
Gammaproteobacteria
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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