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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170078744
CDZV01036671
469002
Verrucomicrobiota
CGC
Ala
>WENV170078452
CDZV01025716
662558
Verrucomicrobiota
GCC
Gly
>WENV170078779
CDZV01038765
662558
Verrucomicrobiota
GCC
Gly
>WENV170079042
CDZV01048226
662558
Verrucomicrobiota
GCC
Gly
>WENV170078985
CDZV01045906
663191
Verrucomicrobiota
TTG
Gln
>WENV170079043
CDZV01048227
662766
Verrucomicrobiota
CTG
Gln
>WENV170078099
CDZV01009718
662760
Verrucomicrobiota
CAC
Val
>WENV170078087
CDZV01009187
469040
Verrucomicrobiota
CAT
Met
>WENV170079238
CDZV01057221
12844
Verrucomicrobiota
GCT
Ser
>WENV170078648
CDZV01033847
286765
Verrucomicrobiota
GGG
Pro
>WENV170078783
CDZV01038766
286765
Verrucomicrobiota
GGG
Pro
>WENV170078986
CDZV01045906
470563
Verrucomicrobiota
GGC
Ala
>WENV170078011
CDZV01005814
468989
Verrucomicrobiota
CTT
Lys
>WENV170078012
CDZV01005814
468989
Verrucomicrobiota
CTT
Lys
>WENV170078013
CDZV01005814
468989
Verrucomicrobiota
CTT
Lys
>WENV170078994
CDZV01046853
468989
Verrucomicrobiota
CTT
Lys
>WENV170078995
CDZV01046853
468989
Verrucomicrobiota
CTT
Lys
>WENV170078996
CDZV01046853
468989
Verrucomicrobiota
CTT
Lys
>WENV170078363
CDZV01021487
242669
Verrucomicrobiota
GTC
Asp
>WENV170079302
CDZV01060162
242669
Verrucomicrobiota
GTC
Asp
>WENV170078252
CDZV01015503
663168
Verrucomicrobiota
GTT
Asn
>WENV170078010
CDZV01005814
662761
Verrucomicrobiota
CGT
Thr
>WENV170078086
CDZV01009187
662758
Verrucomicrobiota
GTG
His
>WENV170079239
CDZV01057221
286784
Verrucomicrobiota
ACG
Arg
>WENV170078048
CDZV01007702
663178
Verrucomicrobiota
GAC
Val
>WENV170078597
CDZV01031903
469030
Verrucomicrobiota
TTT
Lys
>WENV170078293
CDZV01016880
286752
Verrucomicrobiota
TCT
Arg
>WENV170078652
CDZV01033847
285841
Verrucomicrobiota
TGG
Pro
>WENV170078782
CDZV01038766
285841
Verrucomicrobiota
TGG
Pro
>WENV170078651
CDZV01033847
469466
Verrucomicrobiota
GAA
Phe
>WENV170078781
CDZV01038766
469466
Verrucomicrobiota
GAA
Phe
>WENV170078014
CDZV01005814
286773
Verrucomicrobiota
CGG
Pro
>WENV170078357
CDZV01020934
286760
Verrucomicrobiota
CAT
Met
>WENV170078397
CDZV01022863
662614
Verrucomicrobiota
GGT
Thr
>WENV170078778
CDZV01038765
663157
Verrucomicrobiota
CAT
Met
>WENV170078649
CDZV01033847
783783
Verrucomicrobiota
CCC
Gly
>WENV170078784
CDZV01038766
783783
Verrucomicrobiota
CCC
Gly
>WENV170078794
CDZV01039230
663193
Verrucomicrobiota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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