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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
58 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170107213
CEBY01033012
180100
Actinomycetota
GTA
Tyr
>WENV170106719
CEBY01011408
451412
Actinomycetota
GTT
Asn
>WENV170107260
CEBY01035700
451412
Actinomycetota
GTT
Asn
>WENV170107309
CEBY01036709
451412
Actinomycetota
GTT
Asn
>WENV170107849
CEBY01062083
271422
Actinomycetota
GGG
Pro
>WENV170107591
CEBY01049722
274917
Actinomycetota
TAC
Val
>WENV170106556
CEBY01003728
451381
Actinomycetota
CGT
Thr
>WENV170107031
CEBY01026617
451381
Actinomycetota
CGT
Thr
>WENV170107698
CEBY01054298
451359
Actinomycetota
TTT
Lys
>WENV170107838
CEBY01061529
30276
Actinomycetota
GCT
Ser
>WENV170106693
CEBY01009370
30281
Actinomycetota
GAG
Leu
>WENV170107126
CEBY01029942
451442
Actinomycetota
GGC
Ala
>WENV170107739
CEBY01055870
451442
Actinomycetota
GGC
Ala
>WENV170107728
CEBY01055339
270467
Actinomycetota
TGG
Pro
>WENV170107767
CEBY01056943
270467
Actinomycetota
TGG
Pro
>WENV170107189
CEBY01031904
228568
Actinomycetota
TAA
Leu
>WENV170107033
CEBY01026617
451655
Actinomycetota
CCA
Trp
>WENV170107214
CEBY01033012
271229
Actinomycetota
CAT
Met
>WENV170107757
CEBY01056517
271229
Actinomycetota
CAT
Met
>WENV170107822
CEBY01061005
284684
Actinomycetota
TCT
Arg
>WENV170106557
CEBY01003728
217997
Actinomycetota
TAG
Leu
>WENV170107032
CEBY01026617
217997
Actinomycetota
TAG
Leu
>WENV170106884
CEBY01019159
653368
Actinomycetota
CTG
Gln
>WENV170107419
CEBY01041637
270411
Actinomycetota
ACG
Arg
>WENV170107420
CEBY01041637
270411
Actinomycetota
ACG
Arg
>WENV170107421
CEBY01041637
270411
Actinomycetota
ACG
Arg
>WENV170106786
CEBY01013896
451349
Actinomycetota
CCG
Arg
>WENV170106910
CEBY01020671
451413
Actinomycetota
CCT
Arg
>WENV170107458
CEBY01043062
451413
Actinomycetota
CCT
Arg
>WENV170106735
CEBY01011923
779447
Actinomycetota
GCA
Cys
>WENV170106674
CEBY01008367
270415
Actinomycetota
TAT
Ile
>WENV170106854
CEBY01017508
270417
Actinomycetota
CAA
Leu
>WENV170107740
CEBY01055870
779382
Actinomycetota
TTG
Gln
>WENV170107559
CEBY01047602
228578
Actinomycetota
TAA
Leu
>WENV170106779
CEBY01013411
86962
Actinomycetota
TGA
Ser
>WENV170107127
CEBY01029942
270403
Actinomycetota
TGT
Thr
>WENV170106830
CEBY01016353
451410
Actinomycetota
CGT
Thr
>WENV170107487
CEBY01043818
45669
Actinomycetota
GAG
Leu
>WENV170107532
CEBY01046219
72674
Actinomycetota
CGA
Ser
>WENV170107295
CEBY01036677
653819
Actinomycetota
TTC
Glu
>WENV170106474
CEBY01000185
653353
Actinomycetota
GAC
Val
>WENV170106736
CEBY01011923
653353
Actinomycetota
GAC
Val
>WENV170107514
CEBY01045496
653353
Actinomycetota
GAC
Val
>WENV170107579
CEBY01048785
451418
Actinomycetota
CCT
Arg
>WENV170107294
CEBY01036677
270451
Actinomycetota
GTC
Asp
>WENV170107296
CEBY01036677
270451
Actinomycetota
GTC
Asp
>WENV170107842
CEBY01061538
153767
Actinomycetota
CAG
Leu
>WENV170107261
CEBY01035700
451432
Actinomycetota
GTT
Asn
>WENV170107310
CEBY01036709
451432
Actinomycetota
GTT
Asn
>WENV170106777
CEBY01013382
452352
Actinomycetota
GTG
His
>WENV170107630
CEBY01050826
779392
Actinomycetota
CCC
Gly
>WENV170107843
CEBY01061538
779392
Actinomycetota
CCC
Gly
>WENV170107400
CEBY01040273
270520
Actinomycetota
CAT
Met
>WENV170107125
CEBY01029942
451443
Actinomycetota
TGC
Ala
>WENV170106883
CEBY01019159
451402
Actinomycetota
CTC
Glu
>WENV170106757
CEBY01012687
270468
Actinomycetota
GAT
Ile
>WENV170106759
CEBY01012687
270468
Actinomycetota
GAT
Ile
>WENV170107709
CEBY01054722
271427
Actinomycetota
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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