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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170123083
CENO01018168
275828
Alphaproteobacteria
GTC
Asp
>WENV170123146
CENO01022296
46190
Alphaproteobacteria
GGA
Ser
>WENV170123717
CENO01069670
218220
Alphaproteobacteria
>WENV170124179
CENO01113761
46035
Alphaproteobacteria
GGA
Ser
>WENV170123877
CENO01085355
452894
Alphaproteobacteria
CCA
Trp
>WENV170122998
CENO01011618
653532
Alphaproteobacteria
GTT
Asn
>WENV170123182
CENO01024557
454059
Alphaproteobacteria
TTT
Lys
>WENV170123607
CENO01058642
454059
Alphaproteobacteria
TTT
Lys
>WENV170123609
CENO01058797
454059
Alphaproteobacteria
TTT
Lys
>WENV170123391
CENO01039751
273803
Alphaproteobacteria
CCT
Arg
>WENV170123215
CENO01026877
656140
Alphaproteobacteria
GAC
Val
>WENV170123693
CENO01066552
656140
Alphaproteobacteria
GAC
Val
>WENV170123792
CENO01077774
270798
Alphaproteobacteria
CGG
Pro
>WENV170123594
CENO01057762
780582
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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