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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170124247
CENO01118257
456414
Bacteroidota
GAA
Phe
>WENV170123026
CENO01013796
452741
Bacteroidota
TCC
Gly
>WENV170123085
CENO01018334
452741
Bacteroidota
TCC
Gly
>WENV170123159
CENO01023204
452741
Bacteroidota
TCC
Gly
>WENV170123184
CENO01024700
452487
Bacteroidota
CCA
Trp
>WENV170123939
CENO01091844
452487
Bacteroidota
CCA
Trp
>WENV170124351
CENO01122257
452487
Bacteroidota
CCA
Trp
>WENV170123908
CENO01088313
285374
Bacteroidota
GTC
Asp
>WENV170124056
CENO01104114
272122
Bacteroidota
GTC
Asp
>WENV170124160
CENO01112772
655825
Bacteroidota
TTC
Glu
>WENV170124218
CENO01116185
241634
Bacteroidota
TGG
Pro
>WENV170123567
CENO01054973
278725
Bacteroidota
GTT
Asn
>WENV170122863
CENO01001738
240683
Bacteroidota
TGG
Pro
>WENV170122916
CENO01004970
240683
Bacteroidota
TGG
Pro
>WENV170123689
CENO01066391
275165
Bacteroidota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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