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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170147265
CENZ01126753
787650
Bacteroidota
GCA
Cys
>WENV170147369
CENZ01140110
456728
Bacteroidota
CAT
Met
>WENV170147038
CENZ01104353
271717
Bacteroidota
GTC
Asp
>WENV170147309
CENZ01133030
271717
Bacteroidota
GTC
Asp
>WENV170146041
CENZ01028318
456414
Bacteroidota
GAA
Phe
>WENV170146485
CENZ01057795
456414
Bacteroidota
GAA
Phe
>WENV170146703
CENZ01073191
456414
Bacteroidota
GAA
Phe
>WENV170146481
CENZ01057532
241614
Bacteroidota
GAC
Val
>WENV170147137
CENZ01115574
452741
Bacteroidota
TCC
Gly
>WENV170147411
CENZ01145338
452741
Bacteroidota
TCC
Gly
>WENV170147439
CENZ01148748
452741
Bacteroidota
TCC
Gly
>WENV170148047
CENZ01203174
452741
Bacteroidota
TCC
Gly
>WENV170146825
CENZ01084596
452487
Bacteroidota
CCA
Trp
>WENV170147551
CENZ01163130
452487
Bacteroidota
CCA
Trp
>WENV170147538
CENZ01160723
285374
Bacteroidota
GTC
Asp
>WENV170148241
CENZ01278884
452740
Bacteroidota
GAA
Phe
>WENV170146789
CENZ01080890
278725
Bacteroidota
GTT
Asn
>WENV170146865
CENZ01088307
278725
Bacteroidota
GTT
Asn
>WENV170147222
CENZ01123317
271642
Bacteroidota
TCT
Arg
>WENV170146063
CENZ01030025
30383
Bacteroidota
GGA
Ser
>WENV170146438
CENZ01054661
275165
Bacteroidota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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