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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170146315
CENZ01046627
30610
Gammaproteobacteria
TGA
Ser
>WENV170147525
CENZ01158304
274150
Gammaproteobacteria
CAT
Met
>WENV170147141
CENZ01115770
284350
Gammaproteobacteria
TCT
Arg
>WENV170145670
CENZ01003312
270982
Gammaproteobacteria
GAT
Ile
>WENV170147146
CENZ01116245
270982
Gammaproteobacteria
GAT
Ile
>WENV170147245
CENZ01125651
270982
Gammaproteobacteria
GAT
Ile
>WENV170147050
CENZ01106433
272023
Gammaproteobacteria
GAT
Ile
>WENV170145662
CENZ01003150
276971
Gammaproteobacteria
ACG
Arg
>WENV170145663
CENZ01003150
276971
Gammaproteobacteria
ACG
Arg
>WENV170146779
CENZ01080572
451982
Gammaproteobacteria
GGC
Ala
>WENV170148161
CENZ01225028
273749
Gammaproteobacteria
CCA
Trp
>WENV170146701
CENZ01073067
460378
Gammaproteobacteria
TAC
Val
>WENV170148150
CENZ01212487
30520
Gammaproteobacteria
TGA
Ser
>WENV170146487
CENZ01057995
780765
Gammaproteobacteria
CCC
Gly
>WENV170146324
CENZ01046940
459731
Gammaproteobacteria
GGT
Thr
>WENV170146892
CENZ01092149
459731
Gammaproteobacteria
GGT
Thr
>WENV170145937
CENZ01021895
113485
Gammaproteobacteria
CAA
Leu
>WENV170148275
CENZ01295154
452881
Gammaproteobacteria
TGT
Thr
>WENV170145661
CENZ01003150
20134
Gammaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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