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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170161402
CEOK01297533
241299
Bacteroidota
TAC
Val
>WENV170160164
CEOK01120536
273835
Bacteroidota
GTT
Asn
>WENV170161664
CEOK01379119
456729
Bacteroidota
GAA
Phe
>WENV170158725
CEOK01015267
456414
Bacteroidota
GAA
Phe
>WENV170158873
CEOK01023776
456414
Bacteroidota
GAA
Phe
>WENV170159081
CEOK01038951
456414
Bacteroidota
GAA
Phe
>WENV170159099
CEOK01040157
456414
Bacteroidota
GAA
Phe
>WENV170159179
CEOK01046332
456414
Bacteroidota
GAA
Phe
>WENV170159326
CEOK01057027
456414
Bacteroidota
GAA
Phe
>WENV170160934
CEOK01184619
456414
Bacteroidota
GAA
Phe
>WENV170159445
CEOK01064823
452741
Bacteroidota
TCC
Gly
>WENV170158782
CEOK01018926
452487
Bacteroidota
CCA
Trp
>WENV170159918
CEOK01102121
452487
Bacteroidota
CCA
Trp
>WENV170160232
CEOK01126361
452487
Bacteroidota
CCA
Trp
>WENV170160758
CEOK01174127
452487
Bacteroidota
CCA
Trp
>WENV170160864
CEOK01179791
452487
Bacteroidota
CCA
Trp
>WENV170160968
CEOK01186167
452487
Bacteroidota
CCA
Trp
>WENV170160373
CEOK01138511
285374
Bacteroidota
GTC
Asp
>WENV170158774
CEOK01018352
272122
Bacteroidota
GTC
Asp
>WENV170158911
CEOK01026749
272122
Bacteroidota
GTC
Asp
>WENV170159763
CEOK01088876
272122
Bacteroidota
GTC
Asp
>WENV170159770
CEOK01089105
272122
Bacteroidota
GTC
Asp
>WENV170159970
CEOK01106398
272122
Bacteroidota
GTC
Asp
>WENV170160458
CEOK01145775
272122
Bacteroidota
GTC
Asp
>WENV170160623
CEOK01163938
272122
Bacteroidota
GTC
Asp
>WENV170159126
CEOK01042866
655825
Bacteroidota
TTC
Glu
>WENV170159371
CEOK01059647
241407
Bacteroidota
TGG
Pro
>WENV170159121
CEOK01042466
280824
Bacteroidota
TGC
Ala
>WENV170159175
CEOK01046145
280824
Bacteroidota
TGC
Ala
>WENV170159254
CEOK01051877
280824
Bacteroidota
TGC
Ala
>WENV170159725
CEOK01085854
280824
Bacteroidota
TGC
Ala
>WENV170159824
CEOK01093569
280824
Bacteroidota
TGC
Ala
>WENV170160183
CEOK01122360
280824
Bacteroidota
TGC
Ala
>WENV170158764
CEOK01017577
241634
Bacteroidota
TGG
Pro
>WENV170159423
CEOK01063640
277953
Bacteroidota
GTC
Asp
>WENV170158789
CEOK01019316
86958
Bacteroidota
TGA
Ser
>WENV170158858
CEOK01022913
86958
Bacteroidota
TGA
Ser
>WENV170159382
CEOK01060371
86958
Bacteroidota
TGA
Ser
>WENV170159525
CEOK01071238
86958
Bacteroidota
TGA
Ser
>WENV170159608
CEOK01077498
86958
Bacteroidota
TGA
Ser
>WENV170159773
CEOK01089290
86958
Bacteroidota
TGA
Ser
>WENV170159840
CEOK01095680
86958
Bacteroidota
TGA
Ser
>WENV170160918
CEOK01183201
86958
Bacteroidota
TGA
Ser
>WENV170160412
CEOK01141689
655878
Bacteroidota
CCT
Arg
>WENV170159140
CEOK01044146
240683
Bacteroidota
TGG
Pro
>WENV170159160
CEOK01045298
240683
Bacteroidota
TGG
Pro
>WENV170159162
CEOK01045554
240683
Bacteroidota
TGG
Pro
>WENV170159283
CEOK01053795
240683
Bacteroidota
TGG
Pro
>WENV170159650
CEOK01080251
240683
Bacteroidota
TGG
Pro
>WENV170160423
CEOK01142681
240683
Bacteroidota
TGG
Pro
>WENV170160448
CEOK01144879
240683
Bacteroidota
TGG
Pro
>WENV170159112
CEOK01041881
240683
Bacteroidota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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