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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170162670
CEOM01051010
311755
Alphaproteobacteria
>WENV170162227
CEOM01012052
246980
Alphaproteobacteria
>WENV170162309
CEOM01019187
311588
Alphaproteobacteria
CAT
Met
>WENV170163962
CEOM01192207
311588
Alphaproteobacteria
CAT
Met
>WENV170164230
CEOM01206848
310789
Alphaproteobacteria
CAT
Met
>WENV170163137
CEOM01099201
313362
Alphaproteobacteria
CCG
Arg
>WENV170163354
CEOM01122704
313362
Alphaproteobacteria
CCG
Arg
>WENV170163269
CEOM01115545
737487
Alphaproteobacteria
GAA
Phe
>WENV170163316
CEOM01120171
733646
Alphaproteobacteria
GAC
Val
>WENV170164123
CEOM01202196
735797
Alphaproteobacteria
GAC
Val
>WENV170162254
CEOM01014327
737486
Alphaproteobacteria
GCC
Gly
>WENV170162830
CEOM01067748
309663
Alphaproteobacteria
GTC
Asp
>WENV170163446
CEOM01132818
872390
Alphaproteobacteria
TCC
Gly
>WENV170162083
CEOM01000658
307158
Alphaproteobacteria
TGG
Pro
>WENV170163977
CEOM01192753
307158
Alphaproteobacteria
TGG
Pro
>WENV170163331
CEOM01120899
306664
Alphaproteobacteria
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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